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Information for unigene UN02233

FASTA Sequence
Unigene ID: UN02233Length: 1479 SSR 
ATCCAAAAATTAGTTTTCAGTTCTTTTATAAAATATTATTGCAAAATACATAAGCAACCAAATGAAAACATAAGACTTTGTTTTTG
TTTTTGTTTGCGTTTTATGTTTATAAATTAACAAACTTTGTTTAAAAACCATACTTTTAAAAAGAAAATATGCAAACACAAACGCA
GACCATGCTTCAAGATTCCAACATACTCAAGACTGCAGTTTCAGTCAGCGCTTGACGATACCTCATTAGAATCAGGAGGAGGCACA
TCTTCCTCCCCGCTATCATCATCATCATCACTATCTTCTTCTCCACTCACGCCTTCACTAACCATCGGACCTAGAAGGAAGCCGAT
AGACTCGATATTGACCAGAAACTGAGGAACCTGAGCGAGCTCAAGCCTGTGGTCTGGGGTGTGCTGTTGGTTGAATCTCCCTGGAA
CTTTCGAAGGAGTCTCGTAACAGTCTTTGCATAGGTCATAACCAATCTCTTCCTTGCAGTCTTTGCATCTGTATCGCTCCCCTATG
ATTGGATACACTCCGCAACAATCACAACCAGCTCCGATGTGAACATTAGACGCAGGGTTCGCCCACCAGGGAAGATCATTGTTGTT
CTCGCCTGATACGGATGGGCCTTCTTTGTGAGAGCTTTGAATGTTTCCTTTGCTAGTCTGGGGAATCGATTTCTGAATCCCACTTC
TCCTTGAATTGTACTCTTCGGGAAAGTTCTCCTCCAAGAGCTGCTCAAGAACCAAACAAACTTTCGGAAACCCTCTCGGGTCAGAG
ATATGACACTCTTGGCATTTGATCTTTTCGCCTTCTTGGAACATATCTACTACACATACTTCACAATACACATGTCCGCAGTTGAG
AACAACGGGTCGCACAAGCAGCTCCTTACATGCTGAACAGAGCAAATCATCTTTCGAAATTTGCTTACTGACTTTATTATTATTCT
CACCAAGAAGAGCTTTTGCATCTCCACTAGATACAGTCTCTTCATTAGCCTTTGGTTCATCAATCTGAGGTGAAAAACATTCTAGT
TCTTGTCCCTCCTTTAGAACTTGTTCTTCTCTCTTGTGGTGGGCAAGAGGGTAAATCTTCTTGAGGAGGAAGTGGAGCTTTTGGCA
GACAGCAGGAAAGTGAACATAAGGGTCTCTACAAATTGGACAATGAGACTCGCGCAGCTCGTTCATTGACTTATGTACGCACCAGA
AACACGATAGGTGACCACATGATAGCACAATCGGTTTGTAAAGGAGTTCCAGGCAGACGCAGCAGAGAAACTTGTCGGAGATTTCT
TCATGTAGCTCAGCGTTCTTCATTGTAACATCCTCCATAGGTAGAGAGAGATTGGGATTGAGATATTAAAACTTTCTGCAAAATTA
TCAAACAGGAAAAAAGAGAGAGAGAGGGATCTGAGATTTCGACGGTGCGGTGTTTTTGCTTAGCCGCTAAGGGACAGATTTAAGAA
TGATATATGGTGGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_189124 E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]9853e-104
AAM64697 PRT1 [Arabidopsis thaliana]9853e-104
XP_002883562 hypothetical protein ARALYDRAFT_479998 [Arabidopsis lyrata subsp. lyrata]9432e-099
XP_002521101 conserved hypothetical protein [Ricinus communis]8293e-086
BAJ99683 predicted protein [Hordeum vulgare subsp. vulgare]8222e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBL5 E3 ubiquitin-protein ligase PRT19851e-105
Q9NZS9 Bifunctional apoptosis regulator1623e-010
Q8R079 Bifunctional apoptosis regulator1597e-010
Q5PQN2 Bifunctional apoptosis regulator1597e-010
Q5D7I6 Tripartite motif-containing protein 51264e-006

TrEMBL top hits (Blast detail)Scoree value
B9S532 Putative uncharacterized protein8292e-086
B9GQH3 Predicted protein (Fragment)5488e-054
A9PEV7 Putative uncharacterized protein5471e-053
B9H0A3 Predicted protein4871e-046
B8AFI4 Putative uncharacterized protein4682e-044

Arabidopsis top hits (Blast detail)Scoree value
AT3G24800.1 PRT1 (PROTEOLYSIS 1); ubiquitin-protein ligase9851e-106
AT1G74990.1 zinc finger (C3HC4-type RING finger) family protein1282e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information