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Information for unigene UN02235
FASTA Sequence |
Unigene ID: UN02235 | Length: 746 |
SSR | | GGATAAATCTAAAACCACTCTTTCTCTCTTGCGCTAAGAAAAAAAGAAAGAACTCTCCCAAAAGAAGAAGAAGAAGAAAACATGGC
GACAAACGCATCTGCTTTGCTCACGCCAACAACAACCTTTTCCACTACAATCTCCCAGAAAAACCCCAACTCCATCTCATTCCATG
GCCTCCGTTCTCTCCGCCTCGGTGGCCCCTCCTCCTCCGCCTTACCCAAGCTATCCACCACCTCCGGGAGAAGATCTTCCTCCGCT
TTGGTGAGAGCCGAGCTCAGTCCATCCGTCGTTATAAGCCTCAGCACTGGTCTCTCCCTCTTCCTTGGCCGGTTCGTCTTCTTCAA
CTTCCAGAGAGAGAATGTGGCGAAGCAGGTGCCGGAGCAGAACGGCAAAACCCACTTCGAAGCCGGAGACGATCGTGCCAAAGAGT
ACGTTAGCCTCTTGAAATCGAACGACCCTGTTGGATTCAACATCGTTGATGTTCTTGCTTGGGGTTCTATTGGCCACATCGTTGCT
TACTATGTCTTGGTCACTTCTAGCAATGGCTACGATCCTAGCTTCTTTGGCTGATTCTTTCTGGTCTCTCTGTTCCTTGTTCATGT
ATATGTTTGACTTGTATCTCAAGCTGCCAAATGTGTCCTCTTATCTATGTTTCTTCCAACTCTATCATTATTGTCTAGGGCATAAA
TCTCTCTTTCGTTTGCAACACTTCAATATATTTCATGATCCTAAAATAGTTTGGAGAT
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GenBank top hits (Blast detail) | Score | e value |
XP_002894517 hypothetical protein ARALYDRAFT_474626 [Arabidopsis lyrata subsp. lyrata] | 706 | 2e-072 |
NP_175963 photosystem I reaction center subunit V [Arabidopsis thaliana] | 702 | 6e-072 |
CBI39855 unnamed protein product [Vitis vinifera] | 542 | 2e-053 |
XP_002264233 PREDICTED: hypothetical protein [Vitis vinifera] | 540 | 3e-053 |
CAN74757 hypothetical protein VITISV_026412 [Vitis vinifera] | 534 | 2e-052 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9S7N7 Photosystem I reaction center subunit V, chloroplastic | 706 | 9e-074 |
P12357 Photosystem I reaction center subunit V, chloroplastic | 532 | 1e-053 |
Q00327 Photosystem I reaction center subunit V, chloroplastic | 477 | 3e-047 |
Q9SPM4 Photosystem I reaction center subunit V, chloroplastic | 221 | 2e-017 |
P14224 Photosystem I reaction center subunit V, chloroplastic | 177 | 2e-012 |
TrEMBL top hits (Blast detail) | Score | e value |
A5BMA7 Putative uncharacterized protein | 534 | 1e-052 |
C6SWM2 Putative uncharacterized protein | 520 | 5e-051 |
A9PEV3 Putative uncharacterized protein | 517 | 1e-050 |
A9PFU1 Putative uncharacterized protein | 517 | 1e-050 |
A9PHN7 Putative uncharacterized protein | 513 | 3e-050 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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