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Information for unigene UN02236
| FASTA Sequence |
| Unigene ID: UN02236 | Length: 535 |
SSR | | AAAACACGCGAAGTTAATAGTTTTCCAATCACAAAAAAAACATCATCAGACACACACACACTCGCACACTTCAGCTTTATTCATCG
CACCCATGCAACTGCATCAATCTCATCTCTCGCTTTCTTATACAACTCCAGCCTCTGCGCGCACTCTACTCTCCTCCCCATCAATG
CCGGATCTTCATCTAGCAACAGCCCCAACTGTTTCCCCTCTCTCTTGCTGATCTGACTGTAGAAGTAATTAAGCAACGCGAGCTTA
GCCTGTCTAACCTGACAGTAAACACAAGCTTTCGGGATGGTGTTGCGAAGCGTGTCCGAAACCATACCGACGTACGCTGACACGTT
CGATGCTATCCTTCTGAAATGTCCATCTCCGTACAGGTCTTGCGTTGCTGGCGAGGGAGAAGAAGCGGTTTGGTTTCTGCTGTTGG
CTACTACCGCAGGTCTTTCCATTTCTTGAGGAAGTTTCCTGAAGAACTCAGCTGTCAGATAAGCAGACTCCATCTCGACGAGTCTA
ATAACCGACTTCTTGCGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878322 hypothetical protein ARALYDRAFT_486488 [Arabidopsis lyrata subsp. lyrata] | 668 | 2e-068 |
| NP_567094 dynamin-related protein 1E [Arabidopsis thaliana] | 657 | 4e-067 |
| AAL88715 dynamin-like protein E [Arabidopsis thaliana] | 657 | 4e-067 |
| AAF22292 dynamin-like protein 4 [Arabidopsis thaliana] | 596 | 5e-060 |
| XP_002265511 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 516 | 9e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNX5 Dynamin-related protein 1E | 657 | 2e-068 |
| Q8LF21 Dynamin-related protein 1C | 439 | 4e-043 |
| Q8S3C9 Dynamin-related protein 1D | 422 | 4e-041 |
| Q39828 Dynamin-related protein 5A | 293 | 4e-026 |
| Q39821 Dynamin-related protein 12A | 286 | 2e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5CA51 Putative uncharacterized protein | 512 | 2e-050 |
| B9SKH8 Dynamin, putative | 506 | 9e-050 |
| B9MVC5 Predicted protein | 490 | 7e-048 |
| C5WRE6 Putative uncharacterized protein Sb01g028560 | 486 | 2e-047 |
| B9T4N0 Dynamin, putative | 443 | 2e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G60190.1 ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase | 658 | 2e-069 |
| AT1G14830.1 ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase | 439 | 4e-044 |
| AT2G44590.2 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 423 | 3e-042 |
| AT2G44590.3 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 423 | 3e-042 |
| AT2G44590.1 ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | 413 | 5e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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