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Information for unigene UN02271

FASTA Sequence
Unigene ID: UN02271Length: 1290  SNP
GGATCTCTCCTACAAAAAAAAAAAAAACTTTCTTGTTTCTCTTTGACATAAACAAAAAACTCTTTCTGTATCTCCCCTCTCTTCAT
CTTCAACAGAAATGGATTACGAGGTATCAAGAATTTGTGAGATCGTAGAAGATTCAGAGCAGATTGATTTGCTACCTGGATTCAGA
TTTCACCCAACAGATGAAGAACTCATAAGCCACTACCTGAGACCGAAGGTTCTAAACACCCTCTTCTCCGCTATAGCCATTGGCGA
AGTCGATCTCAACAAGGTTGAGCCTTGGGACTTGCCATGGAAGGCTAAGATTGGCGAAAAAGAGTGGTACTTCTTCTGCGTGAGAG
ATCGGAAATACCCAACCGGTTTAAGGACGAACCGGGCTACTAAGGCCGGTTATTGGAAAGCTACAGGGAAAGACAAAGAGATCTTC
AAAGAAAAAGCTCTTGTTGGTATGAAGAAAACTTTGGTTTTCTACGAAGGAAGAGCTCCTAAAGGAGCAAAAACAAACTGGGTCAT
GCACGAGTATCGCTTAGAAGGCGTATATTCAACCGACAATCTTCCTAAAACCGCTAAGAACGAGTGGGTTATTAGTAGGGTTTTTC
AGAAAGGTGCAGACGGTAAGAAGATGCATCTCTACCAGGGGCTCTGTTCAGGGATTAACCAAGTCGAACCGGCTGGTTTACCTCCG
CTGATGGACTCTTTCGCTGGGTCGTTGTCTAACGTGACCTGCTTCTCCGACCAAACAACCTTTGAGGACAAGAGCCACATCTCCGA
GTTAAAAGATGAATGTAACGTTACTATGCTCGGTTCATCATCGACTCATTTAATACCGAACATTGGTTCTCTGCTATACTCCGATC
CTCTGTTTATGCAAGATAATTTTTCGATAGTGAAGATGTTGCTTGACGGTGAAGAAACCAAGTTTAAGAAGAGTATCCAGGATTTC
GGTACTGTTGAAAACGCATTAACCACAAGTTCTTGGGACTGTGACGGTCTGGCTGGTTCGGCCGGTTCGGTGGAGGTCGATTGCTA
TTGGAACTTCTGAATGTGGAAACAGGAACTAATCGAAAATTGGGGTATATATGGGGACAGCAAACAATTAGGAGGTATTTTATGGT
TTATAGTTGTTATGTGTGTTGCTCTAGATTCTAGACTCTAGGACTATTGGATTTACAAGGATATTTGAACATTTGTAAAATTTTGT
AAAAAAATGATCAACTTGTGAAAATCGATTATCATACCATTTGTAATTCATTTATAATTGTCATGATAATAATCTGTGAATATACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875486 ANAC059/ATNAC3 [Arabidopsis lyrata subsp. lyrata]11277e-121
NP_189546 NAC domain-containing protein 3 [Arabidopsis thaliana]10766e-115
XP_002868706 ANAC092/ATNAC2/ATNAC6 [Arabidopsis lyrata subsp. lyrata]9484e-100
NP_198777 NAC domain containing protein 6 [Arabidopsis thaliana]9386e-099
AAM61198 NAM / CUC2-like protein [Arabidopsis thaliana]8983e-094

Swiss-Prot top hits (Blast detail)Scoree value
O04017 Protein CUP-SHAPED COTYLEDON 26183e-063
Q9FRV4 Protein CUP-SHAPED COTYLEDON 15862e-059
Q9S851 Protein CUP-SHAPED COTYLEDON 35549e-056
Q84TE6 NAC domain-containing protein 21/225046e-050
Q9FWX2 NAC domain-containing protein 74723e-046

TrEMBL top hits (Blast detail)Scoree value
Q9LJW3 At3g2903510764e-115
Q9FKA0 No apical meristem-like protein9384e-099
Q8LFU6 NAM / CUC2-like protein8982e-094
B9IDX4 NAC domain protein, IPR0034417843e-081
B9RLW7 NAC domain-containing protein 21/22, putative7825e-081

Arabidopsis top hits (Blast detail)Scoree value
AT3G29035.1 ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3); protein heterodimerization/ transcription factor10825e-118
AT5G39610.1 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6); protein heterodimerization/ protein homodimerization/ transcription factor9382e-101
AT5G61430.1 ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100); transcription factor7572e-080
AT5G07680.1 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription factor7473e-079
AT5G07680.2 ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription factor7269e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  20%
 
103  30%
 
81  10%
 
122  20%
 
92  20%

Unigene MembersMember information