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Information for unigene UN02365

FASTA Sequence
Unigene ID: UN02365Length: 712 SSR 
GTCAAGCAAAGGATACAACAACAAGCAAGCTAAAAGGGAGGAAGGAGATGACTTATCGCGTGGAAGACGATGCAGTTTCTGAACTG
TATCTGAGAGTTGAAGAAGATGGAGTTGAGAAATTAGGTCACTATATTGAACTTGGTGAAGAATCAGAGACAGAAGCAGAGCAGGG
AGAGGAACAAGATTCGTCACCTTCTTCTTCTTCTTCTTGTGGAGGGAAAAGATCTATTTGGTTCTGGATCAAGCTTGCTCTTCTCC
TCGCCTTTCTATCTTCTTTGGCTCTCGCTGCTTACAAATGGCTCGTTCCTTTAATCATGGACGAGGAGCTTATCCCTATCATAAAA
TGGGAGTTGAGGACATTTACACACCCTGTGTTAGGTCTTCTTGTATTCATAATCGTGGCACTGCTCCCTGTAATATTTTTTCCGTC
ACTGCCGTCAATGTGGGTGGCTGGGATTACATTTGGTTTTGGATATGGCCTTCTCCTCACTTACCCCGCTGTAGCTATCGGTGTAT
CTCTTCCTTACTTCATCAGCTATCTCTTCTGCGACAAAATCCAAGGTTGGTTAGAAAGATATCCGGATCAAGCTGCGATGTTGAGA
GCTGCTGGTGGAGGCACTTGGTGTCACCAGTTTCGAGCAGTAACGTTAATCCGGATTTCGCATTCCCTTATGTTGTTTATAACTAC
TGCGCTGTTGCGACTGGTGTGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34216 unnamed protein product [Thellungiella halophila]8414e-088
XP_002874740 hypothetical protein ARALYDRAFT_490019 [Arabidopsis lyrata subsp. lyrata]8102e-084
NP_192937 SNARE associated Golgi family protein [Arabidopsis thaliana]8092e-084
XP_002869802 hypothetical protein ARALYDRAFT_492585 [Arabidopsis lyrata subsp. lyrata]6165e-062
NP_194016 SNARE associated Golgi protein family [Arabidopsis thaliana]6148e-062

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SZ65 Putative uncharacterized protein AT4g120008091e-084
Q84JU5 Putative uncharacterized protein At4g228506146e-062
B9GVU8 Predicted protein5142e-050
Q6NQK3 At1g124505081e-049
B9RBV9 Putative uncharacterized protein5017e-049

Arabidopsis top hits (Blast detail)Scoree value
AT4G12000.1 INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1153 Blast hits to 1150 proteins in 277 species: Archae - 2; Bacteria - 485; Metazoa - 104; Fungi - 24; Plants - 140; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).8099e-087
AT4G22850.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1); Has 1331 Blast hits to 1328 proteins in 349 species: Archae - 4; Bacteria - 600; Metazoa - 103; Fungi - 64; Plants - 162; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).6144e-064
AT4G22850.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1).6144e-064
AT1G12450.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1233 Blast hits to 1230 proteins in 347 species: Archae - 2; Bacteria - 557; Metazoa - 104; Fungi - 72; Plants - 132; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink).5087e-052
AT2G02370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12450.1); Has 1745 Blast hits to 1745 proteins in 446 species: Archae - 2; Bacteria - 792; Metazoa - 108; Fungi - 97; Plants - 119; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink).3483e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
81  50%

Unigene MembersMember information