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Information for unigene UN02392

FASTA Sequence
Unigene ID: UN02392Length: 1087 SSR 
GGCTCTCTCTCTTTGTCACATCTCTCTCTCACGCACACACCAATTGCTCAGGGCAAGTCAAAATACTTCTTTCTGTGTGTAAAAGA
TTATGGACGGTGGTGGTGGTGGTGCAGCGTACAACCCACGAACGGTGGAGGAGGTTTTTAGGGATTTTAAGGGTCGTAGGAATGGC
ATGATTAAGGCTTTAACCACTGATGTTCAGGAGTTTTACCGACTTTGCGATCCAGAAAAGGAGAACTTGTGCCTTTATGGACTCCC
GAATGAGCACTGGGAAGTGAATCTACCAGCTGAAGAGGTTCCCCCTGAGCTCCCGGAGCCTGTCTTGGGTATTAACTTTGCCCGAG
ACGGGATGATGGAAAAGGATTGGTTGTCCCTTGTTGCTGTCCACAGCGATGCATGGCTTCTTGCTGTTGCTTTCTTTTTCGGAGCC
AGGTTTGGATTTGACAAAGCTGATAGGAAACGGCTTTTCAATATGATGAACGACCTCCCGTCAATATTCGAGGTTGTGGCTGGCAC
TGCAAAGAAACAATCAAAGGAGAAGTCCTCTGTTTCCAATAACAGCAGCAACAGATCCAAGTCAAACTCCAATAGAGGATCAGAAC
CTAAGCCCAAGTACTCAAAGCCAGAGCCCAAAGATGAAGAGGAAGAGGAAGAGGAAGAAGGTGTGGAAGAGGATGAGGATGATGAT
GATGATGAGCAAGGGGAAACACAATGTGGGGCATGTGGTGAGAGCTATGCCGCTGATGAGTTCTGGATCTGCTGTGACCTCTGCGA
GAACTGGTTCCATGGGAAGTGTGTCAAGATTACACCAGCCAGAGCTGAGCACATCAAGCAGTACAAGTGCCCATCTTGCAGCAACA
AGAGAGCTCGATCTTAAAAAAAAACTCATTGTTTATTGCCGCCTTTGTCTATTTGCCTTTGCATATGATGAACATTCCCCTAACTG
TTTGGTTAGATCAGATTTGGGTTTTAAGACTTCATGTGATTTGGTTTATCTTTAGGCGCTAGTTAGCCTCTTTGTTCTGTTTTATG
TTTGTTTATTAGAGAGTAAAAACATTTTTAAAACCCAATCAAATGCGTCTGGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874304 hypothetical protein ARALYDRAFT_910695 [Arabidopsis lyrata subsp. lyrata]12477e-135
NP_197993 alfin-like 4 protein [Arabidopsis thaliana]12315e-133
BAE98515 nucleic acid binding protein - like [Arabidopsis thaliana]12243e-132
ADL36568 ALF domain class transcription factor [Malus x domestica]11715e-126
XP_002280895 PREDICTED: hypothetical protein [Vitis vinifera]11222e-120

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g2621012492e-136
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011561e-009
Q5RHD1 Lysine-specific demethylase 7A1272e-006
Q9W352 PHD finger and CXXC domain-containing protein CG174461263e-006
Q6ZMT4 Lysine-specific demethylase 71237e-006

TrEMBL top hits (Blast detail)Scoree value
Q2HIV6 At5g2621012313e-133
Q0WWI3 Nucleic acid binding protein-like12242e-132
B9IKC9 Predicted protein11042e-118
B9HD31 Predicted protein10997e-118
Q06A76 PHD410943e-117

Arabidopsis top hits (Blast detail)Scoree value
AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding12501e-137
AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding10368e-113
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding10279e-112
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding9562e-103
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding9292e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
92  67%

Unigene MembersMember information