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Information for unigene UN02414
| FASTA Sequence |
| Unigene ID: UN02414 | Length: 752 |
SSR | | GGGAAAGACGATAATCCCCTGGAATCTGGATCAGCGTGTCTAAAAAGAAGATAAATAATCTCATGTTAATGGCTTGTGCTTTGTTC
TATTGAAGGCTATTGATTGGAAGACTCATAAAAGAAGAAGAAGAAGAAGGCAAATACTCAATAACAGTCTACGGACATGGAACCGG
AGGTATATTCTTCTAGCGGCGGCGTGAGGAATCTTGAAGCGTCGATTACGGCGTGGCATTTCCAGATAGCAGTCTATTTCGCCTTC
GGATTCTTCTTCTTGAGACTCTTCCTTGATAGATTCGTCTTTCAAAGGATAGCTGTCTGGCTTTTGAGCACCGCTTCTACTGCGCC
TATTAAAATGAACGATGCTTCTACTCTTGCTAAGCTCGTCAAATGCAAGGAGTCTCTGTGGAAGCTCTTGTATTACGGTGCTTGTG
ACGTATTCGTTCTCAAATGTCGTTTTTCACGAGCCATGGGCCACAGATGTCAAACTCTACTTTGAAGGTTGGCCTAATCAAGAGCT
GAAGCTTCCGATAAAGCTGTACTATATGTGTGAGTGCGGTTTCTATATGTATGCTGTTGCTGCCTTGCTTGGATGGGAGACCAGAA
GAAAAGATTTTTCTGTTACGATGTCTCACCATGTCATCACCATCATCCTCCTTGCCTACTCTACTTAACCAGTTTTTCAGAGTTGG
AGCATCATCATAGCCCTTCATGATGCAGCGACGTGTTTATGGAACTGCTAAATTTGCAGTATCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885303 hypothetical protein ARALYDRAFT_318682 [Arabidopsis lyrata subsp. lyrata] | 373 | 8e-034 |
| NP_188557 LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] | 366 | 5e-033 |
| AAF66103 LAG1 homolog 2 [Arabidopsis thaliana] | 366 | 5e-033 |
| XP_002518765 longevity assurance factor, putative [Ricinus communis] | 332 | 5e-029 |
| XP_002282207 PREDICTED: hypothetical protein [Vitis vinifera] | 323 | 5e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJK3 LAG1 longevity assurance homolog 2 | 366 | 3e-034 |
| Q84QC0 ASC1-like protein 3 | 282 | 1e-024 |
| Q6NQI8 LAG1 longevity assurance homolog 3 | 220 | 2e-017 |
| Q6EUN0 ASC1-like protein 1 | 216 | 6e-017 |
| Q8W4Y5 ASC1-like protein | 209 | 4e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RYI1 Longevity assurance factor, putative | 332 | 3e-029 |
| B9N4Y1 Predicted protein | 307 | 3e-026 |
| B9HS09 Predicted protein | 305 | 4e-026 |
| A9NUL2 Putative uncharacterized protein | 302 | 1e-025 |
| Q10NP1 Longevity-assurance protein containing protein, expressed | 282 | 2e-023 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19260.1 LOH2 (LAG ONE HOMOLOGUE 2) | 366 | 2e-035 |
| AT1G13580.1 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 220 | 2e-018 |
| AT1G13580.2 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 220 | 2e-018 |
| AT3G25540.1 LAG1 | 209 | 4e-017 |
| AT1G26200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) (TAIR:AT1G13580.2). | 171 | 1e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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