|
Information for unigene UN02421
FASTA Sequence |
Unigene ID: UN02421 | Length: 871 |
SSR | | TTTTTCAGTGAATCAGATAGCCTGACACGAGTAAGCTGACGCTATCCGTTGCTTGTATTATATTACATCGTCGTTAAAGAATTACT
GATCCGTAGCAGAAATTCGAAAGCTTCGGACCTCTTTTCTCTCTCTCTCTCACTGAACACACACGCTCGGCACGCACAATCTTCCA
TGGCTGCATTTGCAACAGCAGAAGCGTGTGACAGCAACGCAAAACTAATATCAAACGGAGACCTACGCGCTCTCCACCCAATCTTC
AAGATCTATGGCCAAAGAAGATGCTTCTCAGGACCAATCGTGACACTCAAGGTCTTTGAAGACAATGTCCTGGTCAGAAACCAACT
AGAGACCAAAGGAGAAGGTGGAGTTTTAGTTATAGACGGTGGTGGAAGCATGAGATGCGCGCTTGTTGGAGGAAACCTCGGGCAGT
TAGCTCAGAACAACGGGTGGGCAGGGATTGTGGTGAATGGATGCGTTAGAGATGTGGATGAGATCAATGACTGCGATGTCGGGGTT
AGGGCATTGGGCTCTAACCCACTGAAGTCTAGTAAGAAAGGTCACGGTGAGAAGAGTGTGCCGGTTTATATTGGAGGAACTTTGAT
TAGAGATGGAGAGTGGCTTTATGCTGATAGTGATGGTGTCTTGATCTCCAAGACCGAACTCTCCGTTTGATTCAGAATGTTTTCAT
GAGTGGTGAAAGGGAGACTACTGCTGTTTCTTGGAGCAAGCTGGCTTTATTTCGAATTCTTAATAATTGATTTGGTATTCACGTGA
AATCGTTTAAGCGATTTGGGTACTCTATCATAATAAAAAAAAGAAACAAAAATGTTAATCATCTATTTTATTATAGACGAGCTAAA
GAATTTCTTTG
|
|
|
GenBank top hits (Blast detail) | Score | e value |
NP_200437 Regulator of ribonuclease-like protein 3 [Arabidopsis thaliana] | 845 | 2e-088 |
XP_002866134 dimethylmenaquinone methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 838 | 1e-087 |
XP_002529206 Regulator of ribonuclease activity A, putative [Ricinus communis] | 721 | 5e-074 |
XP_002265968 PREDICTED: hypothetical protein [Vitis vinifera] | 696 | 4e-071 |
CAN79693 hypothetical protein VITISV_040370 [Vitis vinifera] | 691 | 1e-070 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9FH13 Regulator of ribonuclease-like protein 3 | 845 | 9e-090 |
Q9FFE0 Regulator of ribonuclease-like protein 2 | 609 | 2e-062 |
Q9M8R9 Regulator of ribonuclease-like protein 1 | 599 | 3e-061 |
Q46ZV6 Regulator of ribonuclease activity A | 512 | 4e-051 |
B2SXN2 Regulator of ribonuclease activity A | 509 | 8e-051 |
TrEMBL top hits (Blast detail) | Score | e value |
B9ST87 Regulator of ribonuclease activity A, putative | 721 | 3e-074 |
A5C5H1 Putative uncharacterized protein | 691 | 1e-070 |
B9N5J4 Predicted protein | 677 | 4e-069 |
B6SMX7 Putative uncharacterized protein | 650 | 6e-066 |
B6T0A4 Regulator of ribonuclease activity A | 649 | 7e-066 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G56260.1 dimethylmenaquinone methyltransferase family protein | 846 | 6e-091 |
AT5G16450.1 dimethylmenaquinone methyltransferase family protein | 610 | 1e-063 |
AT5G16450.2 dimethylmenaquinone methyltransferase family protein | 610 | 1e-063 |
AT3G02770.1 dimethylmenaquinone methyltransferase family protein | 600 | 2e-062 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|