Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN02430

FASTA Sequence
Unigene ID: UN02430Length: 812 SSR 
GGCAAGAAAATCTTTAAATAACCAATACTAATAACTTCCTTTATAAAAAGTTTTCTTTAAAGGAAAATGGTAAGATCTTGCTCTTC
CAAATCAAAGAATCCTTGGACAGATGAAGACAACGCCCCCCAGAAGTTTGCATTTGCATCTGCGTCCAAGAACGGATCCACTCCTA
AGAAAATAGGACTAAGGAGATGTGGGAAGAGTTGCAGAGTGAGAAAGACTGAGAATGCAGGAGCTAAGCATGAGAGCTTCACTCCT
GAAGAAGAAGATCTTATCATCAAGATGCATGCGGCAATGGGAAGCAGATGGCCACTTATTGCACAACATTTACCAGGAAAGATATA
AGAAGAAGTGAAGATGGTTTGGAACACAAAACTAAAAAAGAAACTGTCTCAAATGGGAATAGATCATGTCACTCACCGTCCTTTTT
CTCATGTGCTTGCTGAATACGGCAACATCAACGGTGGTGGTACCCTAAACCCTAATCCCATGAACCAAACCGGTTCCCTTGGACCT
AATCCCTCCTTCAACGAAGATTCTCGTGAACAACAGCAACAACAACAACAACCTGATGATTCAGGAGATCTCATGTTTCATCTACA
AGCAATCAAGCTCATGACTGAGTCATCAAACCAAGTCAAGCCAGAGTCCACGTTTATGTACGCCTCTTCCTCTTCTTCTAACTCGT
CTCCTCCATTGTTCTCTTCAACTTGTTCTACCATAGCTCAGAGAGCTCAGAGGTAACTTCACATGGTCTGACTTTCTTCTGACAAG
AAACCTTCAGTGAAACCAACAGCAGAACTATCTGATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890308 hypothetical protein ARALYDRAFT_472119 [Arabidopsis lyrata subsp. lyrata]9733e-103
NP_173330 myb-like HTH transcriptional regulator-like protein [Arabidopsis thaliana]9562e-101
CBI15301 unnamed protein product [Vitis vinifera]4052e-037
CAN75378 hypothetical protein VITISV_027593 [Vitis vinifera]3731e-033
XP_002266231 PREDICTED: hypothetical protein [Vitis vinifera]3731e-033

Swiss-Prot top hits (Blast detail)Scoree value
O49608 Transcription factor MYB322552e-021
P81394 Myb-related protein 3152444e-020
P20025 Myb-related protein Zm382435e-020
Q8GWP0 Transcription factor MYB392401e-019
Q9SZP1 Transcription repressor MYB42401e-019

TrEMBL top hits (Blast detail)Scoree value
Q9LMD1 F14D16.119562e-101
A5C7N1 Putative uncharacterized protein3737e-034
A5BSP6 Putative uncharacterized protein3602e-032
B9IJQ4 Predicted protein3558e-032
B9IEI5 Predicted protein3531e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G18960.1 myb family transcription factor9561e-103
AT3G28470.1 TDF1 (DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1); DNA binding / transcription factor3233e-030
AT5G56110.1 ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103); DNA binding / transcription factor3027e-028
AT3G02940.1 MYB107 (myb domain protein 107); DNA binding / transcription factor2632e-023
AT3G01140.1 MYB106 (myb domain protein 106); DNA binding / transcription factor2589e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
71  50%

Unigene MembersMember information