RadishBase

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Information for unigene UN02435

FASTA Sequence

Unigene ID: UN02435	Length: 889	SSR
TGGGGAACTCGACTTCATAGCATTCAACACTAGTTACTGCTTTCTCTACGAGGATCAATAATGGTTGCAGAAAACAACAACAAGGA AGTGAAACTCTCTGCTTCAATGGACAACAACAACAACACGAAAGAGTCAAACATTCGTCTCGAGGTTCTTCACAAGGAACCAGCTT TGGTCAAACCCGAATCCGAGACACCAAAGGGTCCTTACTTCTTGTCGAATCTTGATCAGAACATCGCCGTGATCGTCCGTACCATC TACTGTTTCAAATCTGAGGAGAGAGGGAACGAGGAAGCAGTGCAAGTGATCAAGAAAGCTCTGAGTCAAGTACTTGTTCATTACTA TCCTCTTGCTGGACGTCTCACCATAAGTCCTGAAGGTAAACTCACTGTGGATTGTACTGAAGAAGGAGTTGTGTTCGTGGAAGCCG AAGCAAACTGTAAGATGGATGAGATTGGTGACATCACCAAACCAGACCCTGAAACTTTAGGGAAGCTCGTCTATGATGTTGTAGAC GCCAAGAATATTCTTGAAGTCCCTCCTGTTACTGCTCAGGTGACTAAATTCAAGTGTGGAGGGTTTGTTCTTGGACTCTGTATGAA TCATTGTATGTTCGATGGTATTGGAGCTATGGAGTTCGTTAACTCATGGGGTCAAGTCGCTAGAGGCTTACCGTTAACAACTCCTC CTTTCTCGGACAGAACCATTCTCACCGCTCGAAACCCTCCAAAGATCGAGAATCTTCACCAAGAATTCGAAGAGATCGAAGACAAA TCCAGCATCAACTCTCTTTACAGCAAAGAGCCAACTCTCCATAGATCCTTCTGCTTCGATCCCGAGAAATCAAGAAACTTAAGCTC CAAGCACAGAGAACAGTGAATCATCTCTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_851111 omega-hydroxypalmitate O-feruloyl transferase [Arabidopsis thaliana]	1267	2e-137
NP_568587 omega-hydroxypalmitate O-feruloyl transferase [Arabidopsis thaliana]	1218	1e-131
XP_002870657 transferase family protein [Arabidopsis lyrata subsp. lyrata]	1204	5e-130
XP_002512898 Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]	968	1e-102
ADD62404 fatty omega-hydroxyacid/fatty alcohol 0-hydroxycinnamoyl transferase 1 [Quercus suber]	932	2e-098

Swiss-Prot top hits (Blast detail)	Score	e value
Q94CD1 Omega-hydroxypalmitate O-feruloyl transferase	1267	1e-138
Q9M6E2 10-deacetylbaccatin III 10-O-acetyltransferase	300	1e-026
O23917 Anthranilate N-benzoyltransferase protein 2	281	2e-024
O24645 Anthranilate N-benzoyltransferase protein 1	278	5e-024
O23918 Anthranilate N-benzoyltransferase protein 3	276	9e-024

TrEMBL top hits (Blast detail)	Score	e value
B9RH39 Anthranilate N-benzoyltransferase protein, putative	968	8e-103
D5HQM4 Fatty omega-hydroxyacid/fatty alcohol 0-hydroxycinnamoyl transferase 1 (Fragment)	932	1e-098
B9GF58 Predicted protein	923	1e-097
B9GF60 Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein (Fragment)	923	1e-097
D1GJ94 Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase	921	2e-097

Arabidopsis top hits (Blast detail)	Score	e value
AT5G41040.1 transferase family protein	1267	1e-139
AT5G41040.2 transferase family protein	1218	5e-134
AT5G63560.1 transferase family protein	801	1e-085
AT3G48720.1 transferase family protein	781	2e-083
AT1G03390.1 transferase family protein	353	1e-033

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	1			33%


7	1			33%


9	1			33%

Unigene Members	Member information