Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN02453

FASTA Sequence
Unigene ID: UN02453Length: 665  SNP
TTTTTTGCCGCCGCCTTCAGGTAAAGTCAAACAGGTAAACTAAACTTAAAAGATGGGGCGTGTCCGAACCAAGACCGTGAAGAAAT
CATCACGTCAAGTGATCGAGAAGTACTACTCTCGCATGACGCTCGACTTCCACACCAACAAGAAGATCCTCGAAGAAGTCGCCATC
ATCCCTTCCAAGCGTCTCCGCAACAAGATTGCTGGATTCTCCACTCATCTCATGAAGAGGATCCAGAAGGGACCGGTACGTGGCAT
CTCGCTCAAGCTTCAAGAGGAAGAGCGTGAGCGCCGCATGGACTTTGTGCCCGATGAGTCTGCTATCAAGACCGATGAGATCAAGG
TCGACAAGGAGACTCTTGAGATGCTTGCTTCCCTTGGCATGTCTGACGTTGCTGGCGTCTCTGTGGTTGAGCCTCTGACTGTGGCT
CCTGCTTTTGGTGGCAGGCCACAAAGAAGGTTCTAAAGGAGTTTATTATCACTATTATGAGTCAATCAAAGAGAAACCTGCTGTTC
TTATAGTGTTTATTGTTTCTTTTGATTCGAGATTTTTATGTCCCAAGCTGAAAGTGAGACTACTTTTCTACTATATGAGTTTTTGA
GTTTTTGTTGATCGTTTGTTAAGAGGCAACTTGAAATTGCACAACTTGAGATTGTTCAACCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565320 40S ribosomal protein S17-2 [Arabidopsis thaliana]6121e-061
XP_002871114 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]6121e-061
NP_178520 40S ribosomal protein S17-1 [Arabidopsis thaliana]6022e-060
XP_002882688 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]6012e-060
NP_196100 40S ribosomal protein S17-4 [Arabidopsis thaliana]5994e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q9SJ36 40S ribosomal protein S17-26126e-063
P49205 40S ribosomal protein S17-16029e-062
Q9LZ17 40S ribosomal protein S17-45992e-061
Q9SQZ1 40S ribosomal protein S17-35973e-061
P49215 40S ribosomal protein S175517e-056

TrEMBL top hits (Blast detail)Scoree value
B9DGM0 AT5G04800 protein5993e-060
A5BHY1 Putative uncharacterized protein5671e-056
B9SWH2 40S ribosomal protein S17, putative5662e-056
A5B935 Putative uncharacterized protein5609e-056
A9PA24 Putative uncharacterized protein5609e-056

Arabidopsis top hits (Blast detail)Scoree value
AT2G05220.1 40S ribosomal protein S17 (RPS17B)6134e-064
AT2G05220.2 40S ribosomal protein S17 (RPS17B)6134e-064
AT2G04390.1 40S ribosomal protein S17 (RPS17A)6036e-063
AT5G04800.1 40S ribosomal protein S17 (RPS17D)6001e-062
AT5G04800.2 40S ribosomal protein S17 (RPS17D)6001e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  18%
 
122  18%
 
113  27%
 
62  18%
 
92  18%

Unigene MembersMember information