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Information for unigene UN02457

FASTA Sequence
Unigene ID: UN02457Length: 721 SSR 
GGAAGGTCACACACAAGCACAGGGTCTGGTCTTCTTCCTCCAAAAAAAAAATAGAACCTCAAAAAATAAAAATTGGGAAAATTTCA
ATCTTTCCTTCTCCTCCCTCCACTACTCGTTGATCTCGAAGAAGAAGAAGAATAAGAAGAAGAAGAGAACCCGATTAACAGATTGA
GCTGAGAGAATGAAAGGGGCAGCAGCAGGTGTTAAGAAGAAAACCCAGGTGGCCAACGACGCCGGCGAGGCGGAGACAGCGGTGGA
AACAGTCGGAGGAAGCGGGAAAAGAAGTGGAGAAGGCGGCGGGTTTGGCAGTGACGACGGCGGAGGAGGAGGAGGAGAGTCAATTC
TTCGCGAGATGGGTGATGATAGGCGTACGGAGGATGAGGAAGAGGAAGAAGAAGAAGACGACGATGACGAAGAGGAGGAGGATGAA
GAAGAAGATGTCGTAGGAAGAGGAGGGAAAGAGGAAAGGCCAAAGCTTGATGTAGGGTTTTTCGAAATCGAAGCTATTCGTCGTAA
GAGAGTTCGTAAAGGAAAGGTCCAGTATCTAATTAAATGGCGTGGATGGCCAGAAACAGCCAACACATGGGAGCCTAAAGAGAATC
TCCAGTCTATTGCTGATGTTATTGATGCCTTTGAAGGAAGTTTGAAGCCAGGGAAGCCTGGAAGGAAGCCCGGAAGGAAGCGTAAA
CATCCTCCTACTTCTACTCCTCAGTTGAAGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197271 chromo domain-containing protein LHP1 [Arabidopsis thaliana]6757e-069
XP_002873843 predicted protein [Arabidopsis lyrata subsp. lyrata]6757e-069
AAL04059 like heterochromatin protein LHP1 [Arabidopsis thaliana]6722e-068
XP_002319745 chromodomain protein [Populus trichocarpa]4079e-038
XP_002325456 chromo domain protein [Populus trichocarpa]4051e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q946J8 Chromo domain-containing protein LHP16753e-070
Q339W7 Probable chromo domain-containing protein LHP12902e-025
Q944N1 Chromo domain protein LHP12864e-025
Q54PM6 Uncharacterized protein DDB_G02844591817e-013
P30658 Chromobox protein homolog 21621e-010

TrEMBL top hits (Blast detail)Scoree value
Q058P7 At5g176906755e-069
B9I6F0 Chromodomain protein4076e-038
B9IPZ2 Chromo domain protein4051e-037
B9SDA2 Heterochromatin protein, putative3987e-037
A7M6G1 Terminal flower 2 protein3271e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G17690.1 TFL2 (TERMINAL FLOWER 2); DNA binding / methylated histone residue binding6753e-071
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein1459e-010
AT3G17160.1 unknown protein1216e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
211  50%

Unigene MembersMember information