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Information for unigene UN02471
| FASTA Sequence |
| Unigene ID: UN02471 | Length: 884 |
SSR | | GGGACCTAGAAATACATTTTGATTCTTATCCACAATTCAATCTCTTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTTCATCGTCAT
CACAGAGCGTTAATGGCGGCTTCGTTCTCACTCACGAGCTTCATCTCCTTCATCTCCCCATTCAAATCCCGCACCAAACCAACCCC
GCCTCCAAACCTCACTCTCCCCACTCCAACAACAGTCTCCCACAGACGTAGAAACGATCTCGCCGTCGAAACAAAGGCCGTGGACG
CGGATGAGCCTCCTTACAACGCTTCTCTCTCCTCCTCCGAGCTCGCCTCCGTTATATGCCCGTCGCTCGCTTACTCGAACACGCTC
CTCTTCAGCAGCTCCGGGTACAACGTGCAGGTGTTCGTGGAGGATAACGAGTCGGAGGAGAGGCTGGTGAATCGGTTCAGAAGGGA
GGTGATGAGGACGGGGGTTATACAGGAATGCAAGAGGAGGAGGTACTTTGAGAATAAGTAGGACGAGAAGAAGCGGAGGACTCGTG
ATGCTGCTAAGCGTAACAAGAAAAGGCGTCCTTTTGCAAAGTTTACTCAAGAGACCAGAGAAGAAGCAGCAGCGGCAGCAACCAAG
GGTAAGAAGAAGGATGAACAAGAAGATAACTGGGACTGGGAGATGCCTGGCGGAAATGTACCTTCTTGAACACGGTATCCTTTTCT
GGTTACTGATCACTTTTAATTACTTGGTACATTGTAACTTCATATGCGTGTAACTTGCCTCTGGTAATGAGTTCTTGTTAATGTTT
AAGACATCTATACTTGTCTTCCAATGTTTTGTAATGACTAAAATTACCATTTGGTTCGGAGTTTTACTCAAGTGGAGATGAATTAT
GAATGCAGATTGTTCATCTGGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875359 hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata] | 772 | 6e-080 |
| NP_566809 ribosomal protein S21 family protein [Arabidopsis thaliana] | 751 | 2e-077 |
| AAK64005 AT3g27160/MYF5_3 [Arabidopsis thaliana] | 747 | 5e-077 |
| XP_002268728 PREDICTED: hypothetical protein [Vitis vinifera] | 459 | 1e-043 |
| CAN82190 hypothetical protein VITISV_031115 [Vitis vinifera] | 450 | 1e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82024 30S ribosomal protein S21, chloroplastic (Fragment) | 139 | 7e-008 |
| B2UNE2 30S ribosomal protein S21 | 122 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LI88 Genomic DNA, chromosome 3, P1 clone:MYF5 | 751 | 1e-077 |
| Q94BT7 AT3g27160/MYF5_3 | 747 | 3e-077 |
| A5AI30 Putative uncharacterized protein | 450 | 9e-043 |
| Q8VWX5 Ribosome-like protein (Fragment) | 411 | 3e-038 |
| B9RBJ4 Structural constituent of ribosome, putative | 380 | 1e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27160.1 GHS1 (GLUCOSE HYPERSENSITIVE 1); structural constituent of ribosome | 767 | 9e-082 |
| AT5G63300.1 structural constituent of ribosome | 251 | 6e-022 |
| AT5G63300.2 structural constituent of ribosome | 213 | 2e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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