 |
Information for unigene UN02486
| FASTA Sequence |
| Unigene ID: UN02486 | Length: 1283 |
SSR | | GGGTACATTAATGGCGGTTCTGTCGTCTTCTTCTTCTTCTTCGTCGGCGATGCAGAAAGGCATTGTTGTTACGGTACCAGTTCTGG
TTCTAACCGCTTCGTTATCGGCGGTTTTCTTCTTCATCCTATCGTCTTCATTATCCTCCTGCTCATGTCCATCATCTATATCTGAT
GCCATCGTCGGTGATGTGAGGTCTGAGGAGAGAGTTTCGACGTCTCGTGAAGACATAGATTGGGTTAAAGATCTGATTAGATCGAA
CGGTTTGCATATGCACGAGAATGTTCTCCGGAAAGGGATTAGTCCTCGCACAAGGGAGCAGCAACTCCAGGATCTGATTCAGTACA
AAGGTATATCGCATTATGTAGGAGATGAAGCAAGCAACCACACAGCGCTTCCATGCCCTGGTGAGTTACTTGTTGAGGAGCATCAC
AGCAACTACGGTGAGCCTTGGGCTGGTGGGCGTGACGTCTTTGAGTTCTTTGCCGAAGCGTCCCGGCTAAAACCCAACGCCAGAGT
CCTCGAGATAGGGTGCGGTACGCTCCGTGTTGGTCTGCATTTCATCCGTTACCTCGGCCCTGGGAACTTCCACTGCCTCGAAAAAG
ACGAGCTCTCTCTGGTGGCTGCGTTGAGGTACGAGCTTCCTTCTCAAGGTCTTCTGCATAAGCGGCCTCTTATACTCAGAGGGGAA
GATATGGAGTTCAGCAAGTTCGGTTCGGATGTGGGCTATGATCTGATATACGCTAGTGCGGTGTTCTTGCACATGCCTGACGAGCT
GGTTTGGAGTGGAGTCGAGAGGCTGGTTGATAAGTTGAAGCCGTACGAGGGGAGAATGTTTGTGTCGCATAACATAAAGTTTTGTA
CGCGTTTAGGAGGAGAGAAATGCGCAGAGAGACTAGCGAGGTTGGGACTCGAGTCCCTGGGGAGACAGACGCATGACAGTTTGTTG
TTTAATCACTACGAGATCTGGTTCGGGTTTAGACGGATCAAAGGATAAAGTTTAGTTTATGATTTTGATCCCGCGGCATGTAACGG
CTCCATCCTAACAGAAGACTGGTTCGATAGATGATTGTGTTGTGGAGTAAGTTACTACGAGTCTTTGGAGCAAGAGAGCTCACAAA
GCATGAAGTACGCGAATGGTGATGGAGACTCATGTATTGATATATTAGCCAATTGATTTTTTATTTGTTTGTTTCAAAGAGTTGTT
ATATTGTTGTGTGTTTGTAGTTCGAGTTACGTTTTGTTATACTTGAGTATATTGCTGTTTGAATGTTTGGTGGTTGTCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882393 hypothetical protein ARALYDRAFT_317378 [Arabidopsis lyrata subsp. lyrata] | 1382 | 2e-150 |
| XP_002512268 S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] | 1267 | 4e-137 |
| NP_187161 S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] | 1247 | 9e-135 |
| XP_002328526 predicted protein [Populus trichocarpa] | 1191 | 3e-128 |
| XP_002319611 predicted protein [Populus trichocarpa] | 1163 | 5e-125 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9REU9 S-adenosylmethionine-dependent methyltransferase, putative | 1267 | 3e-137 |
| Q9MAA9 Putative uncharacterized protein At3g05100 | 1247 | 6e-135 |
| B9MZK0 Predicted protein | 1191 | 2e-128 |
| B9I895 Predicted protein | 1163 | 3e-125 |
| A5ASW2 Putative uncharacterized protein | 1118 | 6e-120 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); Has 53 Blast hits to 53 proteins in 21 species: Archae - 2; Bacteria - 27; Metazoa - 0; Fungi - 3; Plants - 11; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | 1247 | 3e-137 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
