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Information for unigene UN02497
FASTA Sequence |
Unigene ID: UN02497 | Length: 931 |
SSR | | CATCACAAACAAACAACACCATTAAAACCTTCAAGCAGTACCAATACCACAAACCAAGCATGCGCAGCATGCAAATACCAAGCAGG
AAATGCGCTCCCGATTGTCTTCTCGCTCCTTATTTCCCTCACGACCGTCACCGACAATTCCTCAACGCGCATAAGCTCTTTGGTGT
CAGCAACATCACCAAGATCATCAAAGACCTTAGCCCTCCTGAGAAAGACGCGGCTATGCATACAATCATGTTTCAGTCTGATGCTC
GTGCCAATGATCCCATTGAAGGTTGCTATAGCATCATAAGAAGGCTTCAGTACGAGATCGATTATAATAAGAATGAATTGGACATG
GTTCTTCATCAATTGGCTGTGTTTCGTGACCGTGCTCATAATCATTATCATCAAGAACCGCATATGCAGATGCAAGAACCTGATGA
TCTCTCGAGTTCTCTTGATCTAAACAGCAACAACTCGATTCATTACAGTTACCCGCTTCATCATGTCCAAGAACCAAACCAACAAC
AACAACAATATTGTTTTTCTGGAAACTTCAATGGGTTACAAGAAGACATGTGGTGTCTTCAACTTCAAGATTCACCAACGACAGTG
AATATGAAGGGTGGCTTCGTTGATGAATGTGGGGGCGTTAAGCCTGTAGAAGAGGCTTCTAACGAGTTCGAGCATCATGATGGTTT
CGTTGAAGACAGTAAACTCGACTTGCCTTCAACACAATTCATTGTTTCTTCTTAGCTTTTATTTTCTTGATTTAAGAATCATTTAT
ATAGGGCTTAACAAATAATCCTCTCATAGATCGATCTCAATAGATTTTCTTTTGTACCTTATTTGGTTAAATTCGTTATAGGATTA
GATGTGAAGGAGACATGGAATTTTCAAAAATATATGTCACACAAGAATTTGATGGAATAAAAATTCAGTCG
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GenBank top hits (Blast detail) | Score | e value |
XP_002882855 LOB domain family protein [Arabidopsis lyrata subsp. lyrata] | 931 | 2e-098 |
NP_188001 LOB domain-containing protein 22 [Arabidopsis thaliana] | 921 | 3e-097 |
XP_002527399 LOB domain-containing protein, putative [Ricinus communis] | 507 | 4e-049 |
XP_002275956 PREDICTED: similar to LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) [Vitis vinifera] | 407 | 1e-037 |
XP_002327547 predicted protein [Populus trichocarpa] | 402 | 5e-037 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LRW1 LOB domain-containing protein 22 | 921 | 2e-098 |
Q9SSM9 LOB domain-containing protein 7 | 246 | 3e-020 |
Q9STS6 LOB domain-containing protein 27 | 234 | 7e-019 |
O04479 LOB domain-containing protein 6 | 225 | 8e-018 |
A1YKY7 Protein IAL1 | 222 | 2e-017 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SN30 LOB domain-containing protein, putative | 507 | 2e-049 |
B9MWT1 Predicted protein | 402 | 4e-037 |
B9N2X9 Predicted protein | 399 | 8e-037 |
A2Q435 Putative uncharacterized protein | 289 | 5e-024 |
C5YKR7 Putative uncharacterized protein Sb07g019940 | 284 | 2e-023 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G13850.1 LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) | 922 | 1e-099 |
AT1G72980.1 LBD7 (LOB DOMAIN-CONTAINING PROTEIN 7) | 246 | 3e-021 |
AT3G47870.1 LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27) | 234 | 6e-020 |
AT1G65620.1 AS2 (ASYMMETRIC LEAVES 2); protein binding | 225 | 7e-019 |
AT1G65620.2 AS2 (ASYMMETRIC LEAVES 2); protein binding | 225 | 7e-019 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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