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Information for unigene UN02525
| FASTA Sequence |
| Unigene ID: UN02525 | Length: 1240 |
SSR | | GTAATTAATCTGCTTCTGTTATTAGTAAACATCTTGCAACCATGGAGTAGAAAGAGACGTATGACCTTTCTTGACGTAAACAGATA
CGTATACATATGTGAGATCACGTGTGTATATATGAATTTATCTATATATACTGTATAAACTATAATGTGTGTGCATAAATACATAC
ATACATAGCTGTGTAGATTATGGGTGCCAATTCATGTTAGGAAGCTGAAACGCCTGTCTTAAAACCCCATGATCAGCTAGAGTCGA
CGTCGTATCGATGACTCCATTTCCATGAAACCCCGAACTCTGAGGAATTTCACTAAGCATCGAGACAAATGAGACATTGTAGTTAT
CATTATTGAGATCACTCGTATGATGGAACCTCTTGCTCGATAAGAATGACCCGAAAGAAGATGATCCAGTGGCCTCATGACCTATA
CGATACTGACCACACAAGGAACGTTTGTCCGATGAAACGGCCATACCATCGAAAAAGTGTTCTTCATTGTTATTATTGTTGTTGTT
GTTGTTGTTGTTGTCTAAGACCGATGTGGAAGATGAATTAGCAGATGATTTTGAGAGCATTCCTTCCATGAGATCCTCTCTTAGTA
ATACTCTCTCCATTGTTGGTCTCTGTGAACTATTCTTCTTATAGATCCCGTAGTGAGTTTTTCCTTGACGTGGTTGAGTCAGGTGG
CTTAGCAGCGGTGTTAAGATTACCATCAGTGAGGCGATATTCATGCATGATCCAGTCAGTTTTAATCCCTTTAGGAGGTTTTCCAC
CATAGAATACAAGCGCTTTCTTGACCCCAACCTTGTGACTATTGCACGTAAATATTGGTTTATCGGTTCCCGTGGCTTTCCAGTAA
CCAGAAGTTGCTGCCCGATTCGGCCTAACGCCATTGGGATACTTCCGATCTCTAGGACTAAAGAAGTACCACTCTTGTTCTCCAAA
ACTTGCCTTGCTTGGAAGCTCCCAAGGATCAAACTTGTAAAGATCAATCTCGGCGATGATTGAGACCGGAAGTGGAATAGAAGCAG
CTTTCTTCTTGAGGTAATGAACTACAAGTTCTTCGTCGGTCGGATGAAACCGAAACCCGGGAGGGAGATGCGGATGACCCGGCCCT
ATGGTCGAATCCCCCATGTTTTCCATCAACTAGCTATCTTCAAATGAGTTATTCTACGAAGACAGTCTCATGATACTCAAGGGAGA
ATATGTAGGAAGAGGATTTGATATTTTGGAGAGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM65392 NAM protein, putative [Arabidopsis thaliana] | 886 | 6e-093 |
| NP_564771 NAC domain containing protein 25 [Arabidopsis thaliana] | 880 | 3e-092 |
| XP_002888109 ANAC025 [Arabidopsis lyrata subsp. lyrata] | 873 | 2e-091 |
| AAB71483 similar to NAM (gp|X92205|1321924) and CUC2 (gp|AB002560|1944132) proteins [Arabidopsis thaliana] | 864 | 2e-090 |
| XP_002519008 transcription factor, putative [Ricinus communis] | 709 | 2e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZNU2 NAC domain-containing protein 18 | 645 | 2e-066 |
| O49255 NAC domain-containing protein 29 | 560 | 2e-056 |
| Q52QH4 NAC domain-containing protein 68 | 548 | 4e-055 |
| Q53NF7 NAC domain-containing protein 71 | 530 | 5e-053 |
| Q7F2L3 NAC domain-containing protein 48 | 528 | 9e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAF7 NAM protein, putative | 886 | 4e-093 |
| Q8GY42 At1g61110 | 880 | 2e-092 |
| O22734 F11P17.16 protein | 864 | 2e-090 |
| B9RZ39 Transcription factor, putative | 709 | 1e-072 |
| B9HYM0 NAC domain protein, IPR003441 | 698 | 3e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G61110.1 anac025 (Arabidopsis NAC domain containing protein 25); transcription factor | 880 | 1e-094 |
| AT3G15510.1 ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor | 654 | 2e-068 |
| AT1G52880.1 NAM (NO APICAL MERISTEM); transcription factor | 645 | 2e-067 |
| AT3G04070.1 anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | 563 | 7e-058 |
| AT3G04070.2 anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | 563 | 7e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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