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Information for unigene UN02587

FASTA Sequence
Unigene ID: UN02587Length: 838  SNP
GGAATAATATAGATCAGAACCACGCGTATATTCTTATTTACGTCATCTTCGGCTCAATTAAGTCATCTTCAATCTCAAAGGTGTAA
CTTGGCTCAACAGCAATGTCAAGAGCTAATGATTCTTGTCCTTTGGTAAAAAACATCCTTCTTCTAGACTCTGAAGGAAAACGTGT
GGCTGTCAAGTATTACTCGGATGATTGGACAACTAATGCTGCCAAGTTAGCTTTTGAAAAGTATGTCTTCACGAAGACCTCTAAAA
CCAATGCTCGCACAGAAGCGGAGATCACACTGTTGGAGAATAACATTGTTGTCTATAAGTTTGCCCAGGACCTTCACTTCTTTGTT
ACAGGTGGTGAAGATGAAAACGAGCTCATCTTATCATCTGTTCTACAAGGCTTTTTTGATGCCGTTGCATTACTTCTCAGGAACAA
TGTTGAAAAGATGGAAGCCCTTGAAAACTTGGATCTCATCTTTTTGTGCCTTGATGAGATGGTTGATCAGGGGATGGTATTGGAAA
CAGATGCCAATGTCATTGCGGGAAAAGTAGCAATGCAGAGCACAGAAGCAAGTGGTTCACTCTCTGAACAGACATTAACCCAAGCA
TTCGCAACGGCGAGAGAGCACCTGGCAAGAAGTCTTTTAACATGATTATCATCGTTGTAGCAAAATGATCTTTAATCATGGGCTTT
TAATAGCCATACCTGAAATTGTTGCTGTTCACTAGAGATGAGTGCATGTTTACTCAAGTATCTTATGACTGATTTTCTTACAAATC
GTTTACTTGTATTGTTTCCTTTTGGAATTTAGATCAATTATTCTTTTTTGTTGGCTACCAATAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872400 clathrin adaptor complex small chain family protein [Arabidopsis lyrata subsp. lyrata]8622e-090
NP_567337 coatomer subunit zeta-3 [Arabidopsis thaliana]8496e-089
AAL69490 putative coatomer protein [Arabidopsis thaliana]8488e-089
AAM62512 putative coatomer protein [Arabidopsis thaliana]8452e-088
XP_002884757 clathrin adaptor complex small chain family protein [Arabidopsis lyrata subsp. lyrata]8353e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q8H1F4 Coatomer subunit zeta-38493e-090
Q84LG4 Coatomer subunit zeta-28233e-087
Q940S5 Coatomer subunit zeta-16721e-069
Q6Z844 Coatomer subunit zeta-26648e-069
Q9MAX5 Coatomer subunit zeta-16182e-063

TrEMBL top hits (Blast detail)Scoree value
Q9MB00 Nonclathrin coat protein zeta1-COP8253e-086
Q9MAZ7 Nonclathrin coat protein zeta1-COP7114e-073
Q9MAZ9 Nonclathrin coat protein zeta1-COP7043e-072
A9P8D5 Putative uncharacterized protein6991e-071
A9PBF0 Predicted protein6953e-071

Arabidopsis top hits (Blast detail)Scoree value
AT4G08520.1 clathrin adaptor complex small chain family protein8502e-091
AT3G09800.1 protein binding8181e-087
AT1G60970.1 clathrin adaptor complex small chain family protein6729e-071
AT3G09800.2 protein binding6128e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
917  65%
 
63  12%
 
106  23%

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