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Information for unigene UN02596

FASTA Sequence
Unigene ID: UN02596Length: 796 SSR 
TTTTTTCTTTGGCTCAAAGATACCTTTCTTCTCTGTGTGTGTGCACATTGATAATGTACCTTTTTTTTTAACAATCTGTTAGCATC
TACTGTAAAAACACACAAGTGGAGAATAAACGCATCCCTCTCACTCTCTGTCTTTCTATTTGGCTTCTTGCTCCATCAAGGGAATC
TTCTTCCACGTGTCATCCACACCATCTAACTGGAGCGGCGGGAGCGAGAAGACACTCACCGTAGAGCTTTTACTCCTGATCTCTTG
CAAAACACGCAAGGCAGCGATTGTACTTTTCATGTGGAGGCTCTCCACCAACTTGTGCTCTGCTTGGGCGTTGTTGGCAGAAGAAG
AAGAAGAAGACTCTGTTCCATCGGGGAAGTAGCGGTCGAGCATTGCCTCGGATTCTTTGATGAGCTTGTACAGCAAGTCTGTAGTG
TAAAAAGGTTGCCGAAGAACTTTCTGGATGTAAGGCAAACGCATGAGATCACCGGTTCGCTTGTCGTACTTCTTCAGTATCTTAAC
CAATCCTGTGTAGTTGAGAGCACTGTAGTTCTCGAGGAGAACCATCTCTCCGTGGAGATCAACAATCTCTTTCCTTATGCTCATCA
TCTTCTCCTTTGCTTTGATAATCCTATCTCTCAATTCCTTTAATCGGATGATATACTCTTCCTCCTTCTCGACGAAGAAATTATTG
AATTTCTCCAACTCGTCCTCTAGCAACTGGACGAAACTCATCTCTTCTTTCGACATTTCGTCGCCGGAGGAAGCCAAGGAGGAGGA
GTCTAGTCGGAGACGTTTGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871925 SPX domain-containing protein [Arabidopsis lyrata subsp. lyrata]8147e-085
NP_197515 SPX domain-containing protein 1 [Arabidopsis thaliana]8139e-085
AAM64762 ids4-like protein [Arabidopsis thaliana]8121e-084
XP_002285203 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]7133e-073
CBI28201 unnamed protein product [Vitis vinifera]7116e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q55B06 SPX and EXS domain-containing protein 11503e-009

TrEMBL top hits (Blast detail)Scoree value
Q8RY68 AT5g20150/F5O24_408136e-085
Q8LBH4 Ids4-like protein8128e-085
B7FKF7 Putative uncharacterized protein5368e-053
B9HAK6 Predicted protein5322e-052
B9SES9 Xenotropic and polytropic murine leukemia virus receptor ids-4, putative5322e-052

Arabidopsis top hits (Blast detail)Scoree value
AT5G20150.1 SPX1 (SPX DOMAIN GENE 1)8198e-088
AT2G26660.1 SPX2 (SPX DOMAIN GENE 2)5033e-051
AT5G15330.1 SPX4 (SPX DOMAIN GENE 4)4121e-040
AT2G45130.1 SPX3 (SPX DOMAIN GENE 3)3242e-030
AT1G14040.1 LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03240.1); Has 732 Blast hits to 696 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 238; Fungi - 246; Plants - 151; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).1181e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information