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Information for unigene UN02598
| FASTA Sequence |
| Unigene ID: UN02598 | Length: 1300 |
| SNP | GAAACAAAACCAAAGTACAGCTACAGCTTCATATAATTCAATATGTAAGGTGTTGAAGTAACAAAAATGTCCTCTTTCAGCAGAAA
GCGAAACCATTGAGCCATTAAGCCATCCATTCTTGGTCCCTTTCACTCCCGGATAAGAGAACATCGTGACTCGTGTTGAGTAAATA
GTTTATAACAACTTCAGGTCATACATACTAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAATCATCTTA
AAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCTTTCTTCAAAAAGCAGAGCTACCACCCCTTGTGGACATGGTCTGC
ATAACTCCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTGTGCAAAATACTTGGCCTCTTGTATGCTCTT
CTTCAAATCAAAAGCATCTTTGACTCTATCATCCAAGAACGCCCACGTATCGCGATACTCTGGGGAGTCATCAGTAAGCATATAAA
TCTCGGTGGTTGAGTAAACACCTCCAAGAACAGTGCGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCCAT
ATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTCGCCGGATGCGCTTGAATACTAAGAGCTTGAGGCCATTT
GGACATGTAAGGGATCTGCATCTCCAACCGAATCCTAACGAGCTTGGAAACACGTTCACTGGGAATCAGGTTTTGCAGATCCAAAC
CAGAGTCTACTCTGTCGATAAGCAGTTGCAAGCATTCATCCATGAAGTACTCAACAAGAGCAGCTTCTTTCCTGGAGAAAGAGCCA
ACAATGGAAGGAGACACACCAACTTCTCTCGATCCTGCAATCATCGCTTCCTCCGTCCAACCTAACCTCGGCACGTGGCGAAGAGA
CGCGGCGAGGACACGAGCCTGCTCTTCCTGAAACTCAGCTCTCGGCTTCCTGCTGCTCTCATCTCTACGAGTTCCTTCTCTTGTAC
CCGTGGAAGAAGAAGTGGGATCCGGTTGATTAAGGTTTACGGATTGATTACCAATCGGAGATTCGGTGTGGCCCATCGAGGAGGAA
GTGCAGAGAGGGGAAGTGTAGGAGTAAGGGATGATGGTGGTGGTGGGCCTGGGCTTGGGTAATCGGAGGAGGCGGCTGGTTGCGAA
ACCAGCTCCGAGAAGACGTTTCGCCGCCGTTCGATACATCGCCGGAGTGAATGAGGGAGGGGTTGAGTTTTTTTTTTTTTGGACAC
GGGATGAGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564074 uncharacterized protein [Arabidopsis thaliana] | 1338 | 3e-145 |
| AAM65231 unknown [Arabidopsis thaliana] | 1338 | 3e-145 |
| NP_973861 uncharacterized protein [Arabidopsis thaliana] | 1328 | 4e-144 |
| XP_002893030 hypothetical protein ARALYDRAFT_472138 [Arabidopsis lyrata subsp. lyrata] | 1268 | 3e-137 |
| AAF79297 F14D16.30 [Arabidopsis thaliana] | 1057 | 1e-112 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q68FT1 Ubiquinone biosynthesis protein COQ9, mitochondrial | 392 | 5e-037 |
| Q5RJV0 Ubiquinone biosynthesis protein COQ9, mitochondrial | 392 | 5e-037 |
| O75208 Ubiquinone biosynthesis protein COQ9, mitochondrial | 389 | 1e-036 |
| Q5PPX7 Ubiquinone biosynthesis protein COQ9-B, mitochondrial | 386 | 3e-036 |
| Q8K1Z0 Ubiquinone biosynthesis protein COQ9, mitochondrial | 386 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAP2 Putative uncharacterized protein | 1338 | 2e-145 |
| Q9LMB2 T29M8.1 protein | 1338 | 2e-145 |
| Q9LMB3 F14D16.30 | 1057 | 7e-113 |
| B9MT10 Predicted protein | 950 | 2e-100 |
| B9RR78 Ubiquinone biosynthesis protein COQ9, mitochondrial, putative | 934 | 1e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G19140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 607 Blast hits to 607 proteins in 177 species: Archae - 0; Bacteria - 151; Metazoa - 114; Fungi - 62; Plants - 22; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). | 1344 | 2e-148 |
| AT1G19140.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 598 Blast hits to 598 proteins in 175 species: Archae - 0; Bacteria - 149; Metazoa - 114; Fungi - 60; Plants - 22; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). | 1334 | 3e-147 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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