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Information for unigene UN02605

FASTA Sequence
Unigene ID: UN02605Length: 733 SSR 
GAAAAGAAAACCTAAACTCACAAAAACCTAAAAGCAAAACCTAGTGGACGACGGCGACAGGAGGAGAAGAGAGAAACTCAGATCTT
TTGTCATGGCACCAAAGCAGTCGGACAAGATCGAGAACCCTCCTCCGGCTGCCTCTTCCAGCGAAGAAGAAGAAGAAGAAGAAGAG
TCCGGCTCATCCGGAGAAGAAGAAGAATCCGGATCTTCCGACGACGAAGCTGGCGACGTCCAGTCCAAGCTCACTCAGAAACCTCC
TCCTCCTCCTACGAAGAAAAATCCTGAATCCGATTCCGAAGAAGACGAATCCGAATCCGATTCCGATTCCGAACCTCCCACCAAGA
CCAAGCCTCTCAACACCGTCGCCTCCAAACCAAAGCCAGAGACATCCGGATCCGCTTCCGTGTCTCTCCCCGAGAGCTCTACTACA
GCCAAACGCTCCCTAAAGCAAGCAGACGAAGAAGAGCCTAAGAAGAAGGCGAAGACAACAACAGAGAATGTAAAGAAGAAGAAGGA
TGAAGAGGTTAAGAAGATCTCCGGAGAAGACGCGAAGAAGATGTTCCAGAGACTGTTCAGCGAGACCGACGAAATCGCGATGCTTC
GTGGCTTTCTAGACTTCACATCCACTAGAGGCGACCCTTACGAGAACATGGACGCCTTCTGCGATACGTCAAGACGTTGATCGATT
TCAACGCTTCCAAAGCTCAGATAGTCACCAAGCTCCAGAGTGTAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194251 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]4194e-039
XP_002869685 hypothetical protein ARALYDRAFT_914061 [Arabidopsis lyrata subsp. lyrata]4052e-037
AAC19304 F6N15.6 gene product [Arabidopsis thaliana]2492e-019
XP_002275573 PREDICTED: hypothetical protein [Vitis vinifera]1864e-012
CBI33256 unnamed protein product [Vitis vinifera]1864e-012

Swiss-Prot top hits (Blast detail)Scoree value
Q555V7 VID27-like protein1485e-009
P15771 Nucleolin1476e-009
P0C1J6 FK506-binding protein 41361e-007
Q9P785 LisH domain-containing protein C1711.051323e-007
Q0V3R6 COPII coat assembly protein SEC161306e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SB42 Putative uncharacterized protein AT4g252104193e-039
O81314 F6N15.6 protein2491e-019
Q7SCZ4 Predicted protein1721e-010
A2QEY4 Function: High levels of CP-RBP30 mRNA was found in leaves but not in roots1674e-010
A2FQB5 Putative uncharacterized protein1666e-010

Arabidopsis top hits (Blast detail)Scoree value
AT4G25210.1 transcription regulator4192e-041
AT4G01260.1 transcription regulator2131e-017
AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding1305e-008
AT4G37820.1 unknown protein1262e-007
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding1224e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  40%
 
93  60%

Unigene MembersMember information