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Information for unigene UN02609

FASTA Sequence
Unigene ID: UN02609Length: 895 SSR 
CTGCAACTTTAAGCTACTTGATTATGTAGAAAAAAAGGTTTAAAAACCATCAAATGATCAAATGAAAACATTTAGAAAATCTTCAT
AAAATGTAAACAACGAGAAGCTAGTCTTCAAGAACCCTTCTTCATTAAATGAGACAACTGGTTCAGGAATTGGCTTATGAACATCT
ACAAGCTTTTGAGTCTGCCAAGTTGTCTTGTCTATAATCTCAAATGCAAGTGTTGAAAGAGTTCCTCTGGTGTTCTTGGAGAAAAA
ACATCTCTCTCTCTCTCTCTCTCCGGATGAGTTGGTGTTTCAGGACTTAGAGTAGAAGCTCTGAAGCGAGTCTCTTCAGAGACTCG
GATACTTTAATAAGATCAGAATCTGAATGTCCCGCTGAGACCAAGAGTTTGATCCCCACAGGTAACCGGCACTTATCAAGAAACGA
CTTCTTAGAGCTCACAACCAACAACGAGTCTTCCTTCAGAGCACGATCAGCCATCTTCTCGAGTAGGATCAAGTCGTCTTTAGTCG
AACCGCTCGATTTCTCTAGCTTTAAGAAGACAATAGGTGACTCAGGGTCGCTTGCTAGCGACATCCCCTTGATATCTTTCAATCCT
TTCCACAACAGAGCAATGTTCTGCTTCATCTTAACTAACAACTCAGGGTTTTGATCAATGACATCGATGGCTGTGATCGCAGCGCT
CGCCAGGTACGGTGGCAAAGAAGCAGAGAACACGTATCCTGAACTGCTGAGTCTCTGGTAATCGATGATGCGGGCGTTCCCAGTGC
AGAATCCACCTTCTGTGGCTAGTGCATGTCCCATTGCAGCAGTCACAACATCTATCTTCTCATAGGGACACCGTGATGCTCTGCAA
GACCTCTCCCGGACCGCCAAGCACACCAAAAGAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACH61906 serine palmitoyltransferase long chain base subunit [Brassica rapa subsp. chinensis]8497e-089
NP_568005 serine palmitoyltransferase [Arabidopsis thaliana]8084e-084
XP_002867012 ATLCB1 [Arabidopsis lyrata subsp. lyrata]8059e-084
BAH20117 AT4G36480 [Arabidopsis thaliana]8041e-083
CAB16844 serine C-palmitoyltransferase like protein [Arabidopsis thaliana]7207e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q5R9T5 Serine palmitoyltransferase 13305e-030
O15269 Serine palmitoyltransferase 13233e-029
Q60HD1 Serine palmitoyltransferase 13172e-028
O35704 Serine palmitoyltransferase 13162e-028
O54695 Serine palmitoyltransferase 13144e-028

TrEMBL top hits (Blast detail)Scoree value
B5LED9 Serine palmitoyltransferase long chain base subunit8495e-089
Q94IB8 Serine C-palmitoyltransferase like protein8083e-084
B9DHA0 AT4G36480 protein8048e-084
O23233 Serine C-palmitoyltransferase like protein7205e-074
B9I4S7 Predicted protein6911e-070

Arabidopsis top hits (Blast detail)Scoree value
AT4G36480.1 ATLCB1 (LONG-CHAIN BASE1); protein binding / serine C-palmitoyltransferase8082e-086
AT4G36480.2 ATLCB1 (LONG-CHAIN BASE1); protein binding / serine C-palmitoyltransferase8082e-086

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
81  50%

Unigene MembersMember information