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Information for unigene UN02658
| FASTA Sequence |
| Unigene ID: UN02658 | Length: 892 |
SSR | | AAAATAAAAGAGATTCCTTAGAACTTGCTTACATGAGGATTCGTTCATCAACTAAGACCAAGGATCACTTGACAGAAATACTCAGT
ACAGAGCTCTCAAAAGATTATACAGGCTTACAAGTCTACCAACGTCGTGATCTGAAACAGTCTGTTCATGCAGTGCAAGTTCCCAT
CACCATTGCAGTAGTTACCCTGATCTTCAGAGCTTGACCTCGACATCAACACCAGCAGGAAGATCAAGTTGCATCAAGGAATCAAT
GGTCTGAGCAGTGGGGTAGGGAATATCAATCATCCGCTGGTGGGTCCTGATCTCAAAATGGAGCCTTGCATCCTTGTGGACGTGAG
GAGACTTGAGAACACAGTAGATACGCTTCTTGGTGGGCAATGGGACAGGGCCCATCGTCTTAGCATTAGTATTCCTTGCAGCGTCA
AGTATCTGCTTGCATGAGTCCTCAATAAGAGGCACCCAGTATGATCTAAGCTTGATCCTAATCTTCTGCTTTGGCGCCATCTTATC
TGCAGCCTCTACACTTATCGAGGAAGAGCTCGAAACCTCGGAGGAGGGTTCGTCGAGAGTTTCTGGAGAAAGGGTTTCGGGAGCTG
CGAAGACCCTCTTCGTCGTAAATGATGATGAGATGGAGGGTTTGTTAACAAGGACGGAGCAGCTATGTGTAGGAAGCGAGGAGAGC
AGAGAGACCTTCTGTCTGGTAGAAGACGAAGAAGAGGTGGGATTGGAGAATGAGGGTAATAAGAACGAAGCTACAGAAGAAACCGC
CATTGAATATCAAAACAAGAGGATCGATTGCTCTTCTGTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGTAACGCTGTAA
GGATGTAGCTTCTTCCCGCAGCTTCGTTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABB97026 unknown [Brassica rapa] | 795 | 1e-082 |
| AAW22623 30S ribosomal protein S10-like [Brassica napus] | 770 | 1e-079 |
| ABL97980 30S ribosomal protein S10-like [Brassica rapa] | 759 | 2e-078 |
| NP_187919 30S ribosomal protein S10 [Arabidopsis thaliana] | 740 | 3e-076 |
| XP_002884945 hypothetical protein ARALYDRAFT_478688 [Arabidopsis lyrata subsp. lyrata] | 729 | 6e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LK61 30S ribosomal protein S10, chloroplastic | 740 | 1e-077 |
| Q9M4Y3 30S ribosomal protein S10, chloroplastic | 584 | 2e-059 |
| P17009 Cyanelle 30S ribosomal protein S10 | 352 | 1e-032 |
| P51286 30S ribosomal protein S10, chloroplastic | 348 | 4e-032 |
| B7K833 30S ribosomal protein S10 | 346 | 7e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V615 Putative uncharacterized protein | 795 | 9e-083 |
| Q5MD13 30S ribosomal protein S10-like | 770 | 7e-080 |
| A1YMX4 30S ribosomal protein S10-like | 759 | 1e-078 |
| A5BC08 Putative uncharacterized protein | 591 | 4e-059 |
| B9S9Q5 30S ribosomal protein S10, putative | 563 | 7e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13120.1 30S ribosomal protein S10, chloroplast, putative | 746 | 3e-079 |
| AT3G47370.2 40S ribosomal protein S20 (RPS20B) | 113 | 7e-006 |
| AT3G45030.1 40S ribosomal protein S20 (RPS20A) | 113 | 7e-006 |
| AT3G47370.1 40S ribosomal protein S20 (RPS20B) | 113 | 7e-006 |
| AT3G47370.3 40S ribosomal protein S20 (RPS20B) | 113 | 7e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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