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Information for unigene UN02710

FASTA Sequence
Unigene ID: UN02710Length: 942 SSR 
GTCTAGAGTGCTGAATGAAACGAATGGTAAAATGGTTAGTGGCAAACCGTTGTATGTTGCTCTTGCACAAAGGAAGGAAGAAAGAA
GGGCTAAGCTTCAGGCACAGTTTTCTCAGATGAGACCTGCTTTTATCCCCGGTATGGGTCCTCGTATGCCAATGTTCCCAGGTGGT
GCTCCAGGTCTTGGACAACCGATGTTTTACGGTCAAGGACCTCCACAAATGATCCCTCACCAGGCTGGATTTGGAATCAGCCCCAG
ATGGTTCCTGGAATGAGGCCAGGCTATTTTGGGCCGATGATGCAGCCAGGTCAGCAAGGGCCACGACCAGGTGGAAGACGGTCAGG
TGATGGACCCATGCGCCACCAGCCTCAGCAACCAATGCCATATATGCAGCCACAGGTGATGGCAGGAGGACGTGGACACCGTTACC
CTCGTGGTAGAAACATGCCAGACGGTCCAATGCCAGGAGGAATGGTTCCATTTCCTTATGACATTAACGGAGTGCCTATTATGCCC
GCTGGTGCATTGGCTTCTTCCCTTGCTCAAGCCTCACCTGCTCACCAAAGAACAATTCTGGGTGAGACTCTGTACCCATTAGTGAA
CAAGATAGAGCACGAGAATGCTGCCAAAGTGACGGGGATGCTTCTGGAGATGGATCAGACAGAAGTGCTGCATTTGATAGAGTCAC
CAGAGGCTTTAAATGCTAAAGTTTCAGAGGCGTTGGATGTGTTGAGAAACGTGAATCAGCCTGGTGAAGGCAAGAGTGGTAGCCCA
AGTGATATGATGGCTTCACTTTCTATTAATGATCACTTGTGAGAAGCTTTTGTCTTTGAGTACTGCTTTGAACTCTCTTTCTCTCT
CTCTCTCTTTGATTGACAAAATTTTTGCGGAATGGTTATTTTCTGTTTTGACTTGAAATGATGCTTTTTTGGTTGGATGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878680 PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]7862e-081
AAK25927 putative poly(A) binding protein [Arabidopsis thaliana]7791e-080
NP_179916 poly(A) binding protein 4 [Arabidopsis thaliana]7791e-080
BAD94406 putative poly(A) binding protein [Arabidopsis thaliana]5649e-056
AAF66825 poly(A)-binding protein [Nicotiana tabacum]5568e-055

Swiss-Prot top hits (Blast detail)Scoree value
P42731 Polyadenylate-binding protein 24282e-041
Q05196 Polyadenylate-binding protein 53144e-028
O64380 Polyadenylate-binding protein 32786e-024
Q5KBW2 Polyadenylate-binding protein, cytoplasmic and nuclear2562e-021
Q0U1G2 Polyadenylate-binding protein, cytoplasmic and nuclear2411e-019

TrEMBL top hits (Blast detail)Scoree value
O22173 Putative poly(A) binding protein7797e-081
Q9C5J0 Putative poly(A) binding protein7797e-081
Q56WT6 Putative poly(A) binding protein5646e-056
Q9M6E4 Poly(A)-binding protein (Fragment)5565e-055
Q9M6E6 Poly(A)-binding protein5441e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G23350.1 PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor7803e-083
AT4G34110.1 PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor4282e-042
AT1G49760.1 PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor4004e-039
AT1G71770.1 PAB5 (POLY(A)-BINDING PROTEIN 5); RNA binding / poly(A) binding / translation initiation factor3143e-029
AT1G22760.1 PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding / translation initiation factor2785e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
82  50%

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