 |
Information for unigene UN02710
| FASTA Sequence |
| Unigene ID:UN02710 |
Length: 942 |
GTCTAGAGTGCTGAATGAAACGAATGGTAAAATGGTTAGTGGCAAACCGTTGTATGTTGCTCTTGCACAAAGGAAGGAAGAAAGAA
GGGCTAAGCTTCAGGCACAGTTTTCTCAGATGAGACCTGCTTTTATCCCCGGTATGGGTCCTCGTATGCCAATGTTCCCAGGTGGT
GCTCCAGGTCTTGGACAACCGATGTTTTACGGTCAAGGACCTCCACAAATGATCCCTCACCAGGCTGGATTTGGAATCAGCCCCAG
ATGGTTCCTGGAATGAGGCCAGGCTATTTTGGGCCGATGATGCAGCCAGGTCAGCAAGGGCCACGACCAGGTGGAAGACGGTCAGG
TGATGGACCCATGCGCCACCAGCCTCAGCAACCAATGCCATATATGCAGCCACAGGTGATGGCAGGAGGACGTGGACACCGTTACC
CTCGTGGTAGAAACATGCCAGACGGTCCAATGCCAGGAGGAATGGTTCCATTTCCTTATGACATTAACGGAGTGCCTATTATGCCC
GCTGGTGCATTGGCTTCTTCCCTTGCTCAAGCCTCACCTGCTCACCAAAGAACAATTCTGGGTGAGACTCTGTACCCATTAGTGAA
CAAGATAGAGCACGAGAATGCTGCCAAAGTGACGGGGATGCTTCTGGAGATGGATCAGACAGAAGTGCTGCATTTGATAGAGTCAC
CAGAGGCTTTAAATGCTAAAGTTTCAGAGGCGTTGGATGTGTTGAGAAACGTGAATCAGCCTGGTGAAGGCAAGAGTGGTAGCCCA
AGTGATATGATGGCTTCACTTTCTATTAATGATCACTTGTGAGAAGCTTTTGTCTTTGAGTACTGCTTTGAACTCTCTTTCTCTCT
CTCTCTCTTTGATTGACAAAATTTTTGCGGAATGGTTATTTTCTGTTTTGACTTGAAATGATGCTTTTTTGGTTGGATGATC |
|
|
| GenBank top hits (Blast detail) |
Score | E value |
|---|
| XP_002878680 PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata] | 786 | 2e-081 | | AAK25927 putative poly(A) binding protein [Arabidopsis thaliana] | 779 | 1e-080 | | NP_179916 poly(A) binding protein 4 [Arabidopsis thaliana] | 779 | 1e-080 | | BAD94406 putative poly(A) binding protein [Arabidopsis thaliana] | 564 | 9e-056 | | AAF66825 poly(A)-binding protein [Nicotiana tabacum] | 556 | 8e-055 |
| Swiss-Prot top hits (Blast detail) |
Score | E value |
|---|
| P42731 Polyadenylate-binding protein 2 | 428 | 2e-041 | | Q05196 Polyadenylate-binding protein 5 | 314 | 4e-028 | | O64380 Polyadenylate-binding protein 3 | 278 | 6e-024 | | Q5KBW2 Polyadenylate-binding protein, cytoplasmic and nuclear | 256 | 2e-021 | | Q0U1G2 Polyadenylate-binding protein, cytoplasmic and nuclear | 241 | 1e-019 |
| TrEMBL top hits (Blast detail) |
Score | E value |
|---|
| O22173 Putative poly(A) binding protein | 779 | 7e-081 | | Q9C5J0 Putative poly(A) binding protein | 779 | 7e-081 | | Q56WT6 Putative poly(A) binding protein | 564 | 6e-056 | | Q9M6E4 Poly(A)-binding protein (Fragment) | 556 | 5e-055 | | Q9M6E6 Poly(A)-binding protein | 544 | 1e-053 |
| Arabidopsis top hits (Blast detail) |
Score | E value |
|---|
| AT2G23350.1 PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | 780 | 3e-083 | | AT4G34110.1 PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor | 428 | 2e-042 | | AT1G49760.1 PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | 400 | 4e-039 | | AT1G71770.1 PAB5 (POLY(A)-BINDING PROTEIN 5); RNA binding / poly(A) binding / translation initiation factor | 314 | 3e-029 | | AT1G22760.1 PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding / translation initiation factor | 278 | 5e-025 |
| EST library breakdown for ESTs in the assembly |
| Unigene Members |
 |
|
|
