 |
Information for unigene UN02739
| FASTA Sequence |
| Unigene ID: UN02739 | Length: 1667 |
SSR | | GGATCCAACCTTTTCAACCTTATTTTATGGGTTTGGCTTGAATGAGGAGAAGTAGAATAAAAGGTAAATTTTAAATAAAATCGAGG
AAAAGCCCAGAAAGAAAGAAAGAGCCATTTGTTAATCTTCAAACTCCGGTGAAAAAAGGATGTACGTGAGAGCGCTTCCGACGACA
GATGTGAATCGGAACACGGAGTGGTTCACGTATCCTGGCGTATGGACCACTTATATTCTAATCCTCTTCTTCTTGTGGCTCCTCGT
TCTCTCCGTCTTCCACTGCTCCCCTGGCATCGCCTGGACCATCGTCCACCTCGCCCATTTCACCGTACACTCCTCCAGATCTCTCT
CTCTCTCTCTCTCTTGTTAGATTCAATCAAATCGTGTTAATTTCTTTTTGTTTTGAATTAAAAATTAAAAAAAAGGTGACGTATCA
TTCGTTCCATTGGAAGAAGGGAACACCGTTTGGGGATGATCAAGGGATCTACAACAGGTTGACTTGGTGGGAACAGATTGACAACG
GCAAGCAGCTCACTCGTAACCGCAAGTTCCTCACCGTTGTTCCCATCGTCTTGTAAGCTCCCTTCTCCTTTCAAACCTGAGTTTGA
GTTTGCATTATGTCCTTGTTTCACCATCTTCATTAGCTTTAAGAAATTGGTAATGAATAGCTCTTTTGTCCTTTTTTTGATTTGCA
CTATTATTCTTCACCTAGATAAGATTAGATCCAATGGAGAAGACTAGAGATGCTCTGTCTCTGTCCCTTTGGTTGTTATTATTATA
GATAGTTAAAACTATCTTGATCCTTGTATGCCCCCACCTTGTGCTTTGTCTCCTCCTATCAATTGTTGGAAAAAAGAGATGCTTTC
TTTTTGCCCTTTCTTACTTCTTCTTATGCAGACATGCTTTCACAGAGCTTAATTATTGCCTGTTAATTTTACCCAAAGATTGCATT
TTTGACATGAAACTTTTTTTTCCAATAATATACATCAGAGTCAAGACTTTATTTTGATTTTCTGATTCTTGACTTGAGCTTCAAAC
ATGTTTGCTTACCTGTGTTCAAAATCTTTCCACTGATTCTCTATTATTGGCATCCTAGGGTTTCTCTTTTAATGTTCTCCAGGCAT
GAATGAATGATATAAGAGATTGTCTGAAAGAAATCTGATGCATACAGGTACTTGATAGCTTCTCACACAACAGACTATCAACATCC
GATGCTGTTCCTCAACACCTTGGCCGTATTTGTAATGGTCGTTGCTAAATTCCCGCACATGCACAAGGTCCGCATATTTGGAATCA
ATGGAGACCAATGATGCCTTGATAAGACAAAGCCAAAAAAGCTATTGTGCTTAATGCGAGACAAGTACATTTTGGAAGCTGGAATC
CAGTTACAAAAAAAAATGCCATTGTCACTCACATTTTGATTGCTTCCCAACCGCATGTGTTACTCTCATCCCATGACATATATACT
GTTTCTTTGGGGCTGCTTCTGATCAAATTTCTTTTCTTTTTTTCTGTTGGTCTCTCAGTTTCTTATTTGGTTTAGCGAGGAAATCT
AGGATTTGAATGATTAGTTTGGGGAAGACAGTATCTTTGGAATGCATGCAACTCTTTTTCCGATTTTTTATAGAAGATTATTCACT
ATCAATATTGGAACAGAAAGACTGCTTTATACT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199015 ORMDL domain-containing protein [Arabidopsis thaliana] | 329 | 4e-028 |
| NP_001154758 ORMDL domain-containing protein [Arabidopsis thaliana] | 329 | 4e-028 |
| XP_002870598 ORMDL family protein [Arabidopsis lyrata subsp. lyrata] | 329 | 4e-028 |
| XP_002518881 ormdl, putative [Ricinus communis] | 284 | 6e-023 |
| ACU17097 unknown [Glycine max] | 282 | 1e-022 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O42901 Uncharacterized protein C119.09c | 145 | 3e-008 |
| Q96495 Protein ORM1 | 130 | 2e-006 |
| Q53FV1 ORM1-like protein 2 | 128 | 3e-006 |
| Q06144 Protein ORM2 | 127 | 4e-006 |
| D2I2F3 ORM1-like protein 3 | 127 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FHY3 At5g42000 | 329 | 2e-028 |
| B9RYR2 Ormdl, putative | 284 | 4e-023 |
| C6T5R5 Putative uncharacterized protein | 282 | 7e-023 |
| B9GXV0 Predicted protein | 280 | 1e-022 |
| C6T4U3 Putative uncharacterized protein | 277 | 3e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
