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Information for unigene UN02740

FASTA Sequence
Unigene ID: UN02740Length: 695 SSR 
GGGGATCATGGAGAGGAGGAGATTGAGATCCCTAATTACTTTATCTGCCCAATCTCACTAGAGATTATGAAAGATCCAGTCACGAC
CGTTTCTGGCATCACTTACGACCGTCAAAGCATCGTTCAGTGGCTAGAGAAGGTCCCATCGTGTCCCGTAACGAAGCAGCCTCTTC
CTCTAGACTCCGATCTTACACCTAACCATATGCTTCGCCGTCTGATCCAACACTGGTGCGTCGAGAATGCAACGCGGGGCGTTGTT
AGAATCCCTACGCCTAGAGCTCCTCTAGGGAAGCTTAACATCGTCGAGGAGATCAAGAATCTCAAAAAGTTTGGACAAGAAGCCTT
GAGAAGAGAAGATACGTTAAAGAAGCTTGAAGTTTTGGCTATGGAGGGAGAGGGGAATAGGAGACTGATGTGTGAAGGAGGTGTAC
ATAAGTCTTTGATCTTGTTCGTAGTCAAGTACTGTACTAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGCACAACGT
CGTACCAAAAGGCAGCTAGACGAGTCTCTGCGTCTTCTTTACTTGATAGGTGTTCCATTAAACGAGGCAAGAACAATCTTGATCGA
AAATGATAGAATCTTGGAATCGTTGACTTTGGTTTTAAACCAACAAGACTTCCTCAACAAGGCATATACTATTGTCCTCTTAAGGA
ACTTAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884868 U-box domain-containing protein 24 [Arabidopsis lyrata subsp. lyrata]7374e-076
NP_566402 plant U-box 24 protein [Arabidopsis thaliana]7204e-074
Q9SF15 RecName: Full=E3 ubiquitin-protein ligase PUB24; AltName: Full=Plant U-box protein 24; AltName: Full=U-box domain-containing protein 247204e-074
BAH19773 AT3G11840 [Arabidopsis thaliana]7204e-074
BAD94902 hypothetical protein [Arabidopsis thaliana]5512e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q9SF15 U-box domain-containing protein 247202e-075
Q84TG3 U-box domain-containing protein 233393e-031
Q9SVC6 U-box domain-containing protein 223294e-030
Q9LT79 U-box domain-containing protein 252766e-024
Q9FXA4 U-box domain-containing protein 262596e-022

TrEMBL top hits (Blast detail)Scoree value
B9DGA6 AT3G11840 protein (Fragment)7203e-074
Q570W6 Putative uncharacterized protein At3g118405511e-054
Q0WYC0 Putative uncharacterized protein4362e-041
B9HQ77 Predicted protein4319e-041
B9GHM3 Predicted protein4221e-039

Arabidopsis top hits (Blast detail)Scoree value
AT3G11840.1 PUB24 (PLANT U-BOX 24); binding / ubiquitin-protein ligase7202e-076
AT2G35930.1 PUB23 (PLANT U-BOX 23); ubiquitin-protein ligase3393e-032
AT3G52450.1 PUB22 (PLANT U-BOX 22); ubiquitin-protein ligase3294e-031
AT3G19380.1 PUB25 (PLANT U-BOX 25); binding / ubiquitin-protein ligase2766e-025
AT1G49780.1 PUB26 (PLANT U-BOX 26); binding / ubiquitin-protein ligase2595e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
211  50%

Unigene MembersMember information