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Information for unigene UN02768

FASTA Sequence
Unigene ID: UN02768Length: 1073 SSR 
GGACAAAAAAAAAAATCTCAACTTGTGTTGTGTGTGTGTAGACCGAGAATCCATCCTCAGAAACCCCAAAAAAGAAAAAAAAAAAC
ACTCGAGCACAAATCCAAATCTCATCCTTCTTCTTCTTCTTGCATTCCTTAGATTGTTTGCTTTGCTTTCAATGGACGCTTGATTT
GCTCTGGTAACTTCGTTTAGTGAGAGAGTTTACTATGGATCCTGAAACTGAAAGTACCATGGTGGCTGATGGGACTACTGACTCTG
CTCTTGCGAATGGTGGTTTAACAATGGAGAGTGTTGAAGGAAATGGTGTTGCTTCTGGTGAAACTTTGGATACTAATTCAGGAAGT
CAGAATGAGAATTCTGGAGACAGTTCTGCTTTGGATGCAGTTGAACAGCCGAAGGAGGTAGCTGAGGGCACACAAGTTGAAAGTGT
AGATGGGCCAAAGTATGTTAATGGCCAAAAGGCTCAACGGAAGCTAAAGCCGGAGAAACTCTCTGGTGGTAAGAATGGTCCATCGG
TTCTTATCAAGAAGAAGAAAGAGATTAAAGGTGCAGATGCTAAAGTGGCATCATCTAATGGCTCTGTTGCTCCTACTGCACAAACA
ACAAAGTCTCTGAAGAGTACATCTTTCAATGGTAGAGCGGCTAAGGTCACTGAGCATGGAAAGCAAGACCGTGGACCAGCTGAAAG
CGCCGCCGGGGACAAGGTGAAACCAAAGCCTCAGAAGAAACAAGTCCAGGAGACACCTGAAGATGATGCAGTCTTCTAACCCGAAA
GCAGAAGATGGGAAACCTCGTAAAGTTGGCGCACTTCCAAATTACGGGTTCAGTTTCAAATGTGACCAACGTGCTGAAAAGAGAAG
AGAGTTCTATGTTAAGCTTGAGGAGAAGACTCATGCGAAAGAGGAGGAAATCAATAACATGCAAGCCAAGTCCAAGAAACACAAGA
AGCTGAGCTTAGAAGCTAAGAAAGAGCTTGAACTTCAAAGCACACCCATGCCTAGCTTTTCTCAGCCGCCTAAACAGAGTTAAAGA
AGATACCACCAACAGACCCAAATCTCAAACTTGGGAGGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869282 hypothetical protein ARALYDRAFT_491495 [Arabidopsis lyrata subsp. lyrata]5891e-058
NP_567893 TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]5675e-056
NP_974659 TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]5666e-056
CAA16958 putative protein [Arabidopsis thaliana]4492e-042
CAA22560 putative protein [Arabidopsis thaliana]4492e-042

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94C48 Putative uncharacterized protein At4g323305673e-056
Q3E9S8 Putative uncharacterized protein At4g32330.25664e-056
O49359 Putative uncharacterized protein F10M6.404492e-042
Q9SUV5 Putative uncharacterized protein AT4g323304492e-042
B9RP45 Putative uncharacterized protein2942e-024

Arabidopsis top hits (Blast detail)Scoree value
AT4G32330.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4728 Blast hits to 3313 proteins in 331 species: Archae - 4; Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants - 233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI BLink).5672e-058
AT4G32330.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4728 Blast hits to 3313 proteins in 331 species: Archae - 4; Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants - 233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI BLink).5672e-058
AT4G32330.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4582 Blast hits to 3307 proteins in 347 species: Archae - 4; Bacteria - 425; Metazoa - 2127; Fungi - 421; Plants - 244; Viruses - 22; Other Eukaryotes - 1339 (source: NCBI BLink).5662e-058
AT2G25480.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32330.2); Has 1787 Blast hits to 1426 proteins in 179 species: Archae - 0; Bacteria - 73; Metazoa - 901; Fungi - 138; Plants - 185; Viruses - 2; Other Eukaryotes - 488 (source: NCBI BLink).3208e-030
AT2G35880.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32330.3); Has 14997 Blast hits to 8919 proteins in 586 species: Archae - 10; Bacteria - 1037; Metazoa - 6567; Fungi - 1700; Plants - 594; Viruses - 59; Other Eukaryotes - 5030 (source: NCBI BLink).1828e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  50%
 
81  50%

Unigene MembersMember information