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Information for unigene UN02770

FASTA Sequence
Unigene ID: UN02770Length: 720 SSR 
GGGTTAGCAAAAATCGAATCGGATCTCAGTGAACAGAGAGACAAATCGATCGAGCGAAGATGACGGAGGCGATGATAAGGAAGAAG
CCGGGGATGGCGAGCGTAAAGGATATGCCGCTGCTTCAGGATGGTCCACCGCCGGGTGGGTTCGCGCCGGTCCGATACGCTCGCCG
GATATCCAACACGGGTCCTAGCGCCATGGCGATTTTCCTCACCGTCTCTGGTGCCTTTGCTTGGGGAATGTACCAGGTCGGGCAAG
GAAACAAAATCCGCAGGGCGTTGAAGGAAGAGAAATATGCTGCTCGTAGAGCAATACTTCCCATTCTTCAAGCTGAAGAAGATGAA
AGGTTTGTGTCGGAGTGGAAAAAGTATCTGGACTACGAGGCTGATGTAATGAAGGATGTCCCGGGATGGAAAGTTGGTGAGAACGT
TTACAATTCTGGTCGTTGGATGCCACCGGCCACTGGGGAACTTCGTCCTGATGTCTGGTGATCGCTTCTTAGTTTCTCTCACAAAG
TCATATGATGATGATGATGAATGAATGTTTCAGTGAGTATTAATAATATGTTCTTGTTTTATCTTTTTCGTCGGGTAATATGAGAA
ATAATGATTCAACAGACAGTTGGTATTGTTTTGGTTTTGCTTGAATATTAATCTTTTTTTGTAATTGTTACGAGATAACGATGAGT
TTCATCAGACATCAAATAAACCCTTCATTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565761 NADH dehydrogenase [Arabidopsis thaliana]7601e-078
XP_002892230 hypothetical protein ARALYDRAFT_470446 [Arabidopsis lyrata subsp. lyrata]7511e-077
NP_171957 GRIM-19 protein [Arabidopsis thaliana]7439e-077
ACJ85924 unknown [Medicago truncatula]6991e-071
XP_002297835 predicted protein [Populus trichocarpa]6802e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q95KV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132722e-023
Q0MQ89 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132694e-023
Q9P0J0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132694e-023
Q0MQ90 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132694e-023
Q4R6H1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132677e-023

TrEMBL top hits (Blast detail)Scoree value
O49313 Expressed protein7607e-079
Q8RWA7 Putative uncharacterized protein At1g046307437e-077
B7FME1 Putative uncharacterized protein6998e-072
B9GMI9 Predicted protein6801e-069
B9RWQ3 NADH dehydrogenase, putative6792e-069

Arabidopsis top hits (Blast detail)Scoree value
AT2G33220.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, plastid, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GRIM-19 (InterPro:IPR009346); BEST Arabidopsis thaliana protein match is: MEE4 (maternal effect embryo arrest 4) (TAIR:AT1G04630.1); Has 226 Blast hits to 226 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 53; Plants - 38; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).7613e-081
AT1G04630.1 MEE4 (maternal effect embryo arrest 4)7443e-079

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  75%
 
81  25%

Unigene MembersMember information