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Information for unigene UN02780

FASTA Sequence
Unigene ID: UN02780Length: 1306 SSR 
GGGATCCAATAAAATAAAAGGAGGGGAAGAGAGAGAGAGATCCCTTTGTCAACGAGAAGAATCTGTATTTCTCGAGAAGAATCTTG
TTCAATCCGGAGATGGGTTTGTTAGAATCTGTGAAATCGATCAAGTGGGAACTCGAGTCACCTCCGGTTTACCAGGATTTTCGTCT
TCTTCCTCTCTTCGCTGTGTTCTTCCCTTCGATTCGGTTCTTCCTCGATAGATTCGTCTTCGAGAAATTGGCAAAACATTTGATAT
ATGGGAAACAGTGACAGAATATTGGAGATGTTGCAACCGAGAGACGCAAGAAAATCAGGAAATTCAAAGAATCAGCCTGGAAGTGT
GTTTACTATCTATCAGCTGAGGTTCTTGCTCTTTCTGTGACTTACAATGAGCCTTGGTTTATGAACACTAAATACTTTTGGGTTGG
TCCTGGAGATCAGTCCTGGCCTAATCAACAAACCAAGTTAAAGTTGAAGCTTTTGTATATGTTTGTGGCTGGATTCTATACATACT
CAATCTTTGCTCTCATCTTCTGGGAAACAAGACGTTCTGATTTTGGAGTTTCAATGGGTCATCATATCGCTACTCTTATTCTTATT
GTCCTCTCATACGTATGTAGCTTCTCTCGTGTTGGTTCGGTTGTTCTGGCACTTCATGATGCAAGTGATGTGTTTCTTGAAGTTGG
GAAAATGTCTAAATATAGTGGAGCCGAAGGAATCGCAAGCTTTTCATTCATTCTTTTCGTTTTGTCTTGGATTATTCTTCGCCTCA
TTTACTATCCCTTTTGGATCCTATGGAGCACAAGCTATGAAGTAGTTTTGGAACTAGATAAGGACAAGCACCCGGTTGAAGGACCT
ATTTACTACTACATGTTCAACACTCTTCTTTATTGTTTGCTTGTTCTCCACATCTATTGGTGGGTTTTGATGTATCGGATGCTTGT
GAAACAAATACAAGATAGAGGCAAACTCAGTGAAGATGTCAGATCCGATTCTGAAGGGGAAGATGAGCATGAGGATTGATTGATAT
ACAAAGGTATGAGGAGGTTATGAAATGTAAAATTTTGGCATATCCTCTTTAACAATATTATATTCTTTTGTTGGGTCTATGTGGTT
CTGATCACTAATGGATGTTGAGGGTAGAGACCGAGTCTTCAATCTCCAACACTGGACCAGCTCATGAACATAATGGATTAAGCATC
TCTCATTCTAGCGATTTGTAAATTTTTAAATTGTAATTCTATTAAATTGTAAATTGAACATATTAAATATCTGCCTTTGCTGTATT
TTATTGTATTTTTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001031037 LAG1 longevity assurance homolog 3 [Arabidopsis thaliana]15443e-169
XP_002892760 hypothetical protein ARALYDRAFT_471517 [Arabidopsis lyrata subsp. lyrata]15443e-169
BAH56987 AT1G13580 [Arabidopsis thaliana]15401e-168
ABV89617 Lag1 longevity assurance-like 3 [Brassica rapa]13472e-146
XP_002311424 predicted protein [Populus trichocarpa]13203e-143

Swiss-Prot top hits (Blast detail)Scoree value
Q6NQI8 LAG1 longevity assurance homolog 315441e-170
Q9LDF2 LAG1 longevity assurance homolog 113012e-142
Q8W4Y5 ASC1-like protein12116e-132
Q6EUN0 ASC1-like protein 111328e-123
Q6YWS8 ASC1-like protein 210432e-112

TrEMBL top hits (Blast detail)Scoree value
C0Z2Q8 AT1G13580 protein15407e-169
A8IXH2 Lag1 longevity assurance-like 313472e-146
B9HIW5 Predicted protein13202e-143
A9PHZ0 Putative uncharacterized protein13193e-143
B9HWR6 Predicted protein13023e-141

Arabidopsis top hits (Blast detail)Scoree value
AT1G13580.2 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)15451e-171
AT3G25540.1 LAG113021e-143
AT1G13580.1 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)11561e-126
AT1G26200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) (TAIR:AT1G13580.2).9428e-102
AT3G19260.1 LOH2 (LAG ONE HOMOLOGUE 2)6972e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  33%
 
82  67%

Unigene MembersMember information