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Information for unigene UN02787

FASTA Sequence
Unigene ID: UN02787Length: 1006 SSR 
GGAATTTTGTGTGTTAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGATATTTCTAGGGTTTGTTCGATTCTCCGACAACGATGAT
GAATCCCGAGGATGCGAAGGCGAAAGGAGATTCGACGGAGGTGGAATCTGACTCTTCTGTCTCTAAAAAACCGAAGATCGAAGATG
AAGACGACACAGGCATGGAAGACGAAGTCGATAGCGATAGCAATAACCCATACTTATGGAGTGCCGACGAAGAAGACGATGACTCT
CCGACAATCAACTATTCAAACTTGCAAGATCCGGAACCGGAGTGGGACAAGGACAGTTACGACGACCACGAATTGGTATTCGATGC
TGACGGCCGTAAAGGTTTCTCCAGCGACAAGGCGTATGAAGAGTTCCGCGAGTATAAAACCATGTGCTTTAAGAATAGGGGGTTTA
TAGATGATCCATTCAGATCCATCTACCCCATGAGAGATCTGGACGATCTCTCGATAACCCCGACTGATAGGCAATATTTGACAGAT
ATTGCTTCCCTCTGTGTTAAGAAACTCAACGAGCAGAATGGTTCGTCTGTGGAAGTTGTAAGCATTGTGAGAGGCAATCTTAAACC
AGGAGGTGGGTTTAAGCTTTACATCACCTTTATGGCTCGAGAGTATCCTAATGGTCCTCCCGTGGAGTATCAAGCCAAGGCCATGG
ATTTTGCGGGAGACAAAATACCTCCATTTCCCATTCTCTGCAGACCAACGTCTAGCATGCCTTAAAGATTGGGTATGATCCTCTTC
TAGAGGAAGATGAAGATCAAAATAAGGATTTTCAGTTATAAGTTTCATGAGTTCTCATGTGGATTTAGCTTTTCTATTTGGCTTTC
AAACTTATAAGTTGTATCTTATAATGGTTGCTATTTTATGTTCAATGTTTCTTTTATATTTTGGAGGTTTAAGTGGAGAGTATACA
TTCATTCTAACACTAGTGCATTGATCCCTTTTATATTAGACTTTCTCACAACATTTAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197214 cystatin-related protein [Arabidopsis thaliana]4251e-039
NP_197217 cystatin-related protein [Arabidopsis thaliana]4251e-039
NP_197211 cystatin-related protein [Arabidopsis thaliana]4152e-038
XP_002873811 hypothetical protein ARALYDRAFT_661552 [Arabidopsis lyrata subsp. lyrata]3613e-032
XP_002873810 predicted protein [Arabidopsis lyrata subsp. lyrata]3481e-030

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LFJ1 Putative uncharacterized protein F2K13_2704259e-040
Q9LFJ4 Putative uncharacterized protein F2K13_2404151e-038
Q9LFJ2 Putative uncharacterized protein F2K13_2603471e-030
Q58FU2 Putative uncharacterized protein3228e-028
Q9LFJ3 Putative uncharacterized protein F2K13_2503228e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G17120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17150.1); Has 47 Blast hits to 45 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).4255e-042
AT5G17150.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, embryo, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17120.1); Has 23 Blast hits to 23 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4255e-042
AT5G17090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17120.1); Has 28 Blast hits to 26 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4157e-041
AT5G17110.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17100.1); Has 34 Blast hits to 32 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3476e-033
AT5G17100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17110.1); Has 36 Blast hits to 34 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3224e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
64  50%
 
122  25%

Unigene MembersMember information