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Information for unigene UN02815
| FASTA Sequence |
| Unigene ID: UN02815 | Length: 1831 |
| SNP | CGTCATGTACGGGTTATTTGACTACAGATTAAACCAGATTTAGACAGATTTAATAAGTAATAGTCAACAAATAGGAATTCATTTAT
CAACAGTTTTTTTCTTCCATTTGAACTCATTTCAATAATTCTTTTAGTTGCTTTGATAGGTGCAATTTCTGTGGCTCGTCAATAAA
AAAGGTTGCGATTAGTAAATACCAAAGAAAACTTTGTCTTTGTGTATGTTATGATATTTTTTCCGTCCATTCCATTCAATTTGATT
TGATTTAATACTATTTCATTTTTTAAATATCAATTTTTATATTTGATATATATTTGAAATTTTTTCCCTAATATAGTTTTTATTCG
TACTTTGTTGTTATATTCTAGTTGATTGAATCCGGTGAATTGTTTTTATTATTCATATTGAATAATGAATCAAAATTGATAAGGAG
TTGCTCAATGATACTCGAACATGTACTTGTTTTGAGTGCCTATTTATTTTTGATTGGTCTTTATGGATTGATCACGAGTCGAAATA
TGGTTAGGGCTCTTATGTGCCTTGAACTTATACTCAATGCAGTTAATATGAATTTCGTAACATTTGCTGATTTTTTTGATAATTCC
CAACTAAAAGGGGATATTTTCTGCATTTTTGTTATAGCAATTGCAGCCGCTGAAGCAGCTATTGGATTAGCTATAGTCTCGTCAAT
TTATCGTAACAGAAAATCAACTCGCATCAACCAATCGACCTTATTAAATAAGTAGCATAAATCAAAAAATTATAGGTTTAAATTTG
CATATATGATAGGTTATGACTTACTAGATTAAATTTGTGAAAATCTAAGAAATCAAAGTATTTTAGCCCCATTTTTTACCAATTGA
GCCAGAATTCATTAAAAAAATTCTATTAAAGGAAATCATTGCTTCATCTAGTATTTTAATTTAATATATCATTTAGTTATAAGTTT
ACTAGATTGAAAATTTATGACATTCAAAAAACTATAGATCCTATGTCACATTCAGTAAAAATTTATGATACCTGTATAGGATGTAC
TCAGTGTGTCCGAGCATGTCCTACAGACGTATTAGAAATGATACCTTGGGATGGATGTAAAGCTAAACAAATAGCTTCTGCCCCAA
GAACCGAGGATTGTGTTGGTTGTAAGAGATGTGAATCTGCCTGTCCAACGGATTTTTTGAGCGTTCGAGTTTATTTATGGCATGAA
ACAACTCGAAGCATGGGTCTAGCTTATTGATACGTTACCGAAAACCTGATTTGAATAAATTTGGAATACACTTTTTTTTTTTATTG
ACAAGTACTCGTACTCAAAAAAGTTCAATTATATTTTTTTATTTATATATTTTTTTGAGTACGCGTTCTTTGGACCTGGTGTATCT
TGTCTTTACCACGAATGATTTTCCTTGGTTAACAATAATTGTTGTTTTTCCAATATCTGCCGGTTCATTAATGTTATTTCTCCCGC
ATAGGGGAAATAAAGTTAATAAGTGGTATACTATATGCATTTGTATCTTAGAACTTCTTCTAACGACTTACGCTTTTTGTTATAAT
TTTAAACTGGACGATCCACTAATTCAACTGTCCGAAGATTATAAATGGATCAATTTTTTTGATTTTTATTGGAGAAAGCGTGTAAC
CCGTTTCTGCGCACTGGGAATATGGATATTCGCCGGGTTCTAGGTATTCCAGAGACTGCTGATGAAGCAGAAGCTCTGGGTGTTAT
GAGAAGAGCAAAGGACAATTTTAAAGCTTAAGCTAAAACAGTAGATAATTTTATCTTCGTACAGAACTACAGATCATGAATAGTTT
GGCTTAATAATGTTTTCATTGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| YP_001123427 NADH dehydrogenase subunit 4L [Capsella bursa-pastoris] | 489 | 1e-046 |
| YP_001123516 NADH dehydrogenase subunit 4L [Crucihimalaya wallichii] | 486 | 3e-046 |
| ACY66257 NADH dehydrogenase subunit 4L [Brassica napus] | 486 | 3e-046 |
| YP_001123082 NADH dehydrogenase ND4L [Aethionema grandiflorum] | 485 | 3e-046 |
| XP_002863296 NADH-plastoquinone oxidoreductase subunit 4L [Arabidopsis lyrata subsp. lyrata] | 485 | 3e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A4QKP7 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic | 489 | 5e-048 |
| A4QLG1 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic | 489 | 5e-048 |
| A4QLY7 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic | 489 | 5e-048 |
| A4QKY6 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic | 486 | 1e-047 |
| A4QJG8 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic | 485 | 1e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1L8U1 NADH dehydrogenase subunit 4L | 486 | 2e-046 |
| D1L8T9 NADH dehydrogenase subunit 4 | 469 | 2e-044 |
| B0Z4S6 Photosystem I subunit VII | 457 | 4e-043 |
| B0Z510 Photosystem I subunit VII | 457 | 4e-043 |
| B0Z594 Photosystem I subunit VII | 457 | 4e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| ATCG01070.1 NADH dehydrogenase ND4L | 480 | 4e-048 |
| ATCG01050.1 Represents a plastid-encoded subunit of a NAD(P)H dehydrogenase complex. Its mRNA is edited at four positions. Translation data is not available for this gene. | 472 | 4e-047 |
| ATCG01060.1 Encodes the PsaC subunit of photosystem I. | 458 | 2e-045 |
| AT1G06130.1 GLX2-4 (glyoxalase 2-4); hydrolase/ hydroxyacylglutathione hydrolase/ zinc ion binding | 201 | 1e-015 |
| AT1G06130.2 GLX2-4 (glyoxalase 2-4); hydrolase/ hydroxyacylglutathione hydrolase/ zinc ion binding | 201 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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