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Information for unigene UN02839

FASTA Sequence
Unigene ID: UN02839Length: 657  SNP
GGCTCTGCTCCGTCTCTTTGCTTCTCCTCCGTCACTGAGCGACCTGCCTCCCGAGCTGCCAATCTAAGAAGAGGCTTGAGCTTAAG
GAGAAAATGGTGAGAATCAGTGTGCTCAACGATGCTCTCAAGAGCATGTTCAATGCCGAGAAACGTGGCAAGAGGCAGGTCATGAT
CAGGCCTTCCTCAAAAGTCATCATCAAGTTTCTTATCGTCATGCAGAAGCACGGTTACATTGGTGAGTTTGAGTACGTCGATGACC
ACCGATCCGGCAAAATCGTTGTGGAATTGAACGGGAGGTTGAACAAGTGTGGTGTTATCAGTCCTCGTTTTGATGTTGGTGTCAAG
GAGATTGAAGGTTGGACTGCTCGTTTGCTTCCTTCCCGACAGTTCGGGTACATCGTGTTGACTACTTCAGCTGGGATTATGGACCA
TGAAGAAGCGAGGAGAAAGAACGTCGGAGGCAAGGTCCTCGGTTTCTTCTATTGAAGTTCTCTGTGGGGAAAAGAGACTTTTCATT
CTATTATGTTTAACTATTGTTATCAATTTGTCTTTTGAATTTTTGTGGTAACTCTGTTGGATAGTTCTGAAATTACTCCCTTTTTG
GTCTTGACTGCTTGAAAGATTCATTTGGATTCACATTTAAGTACTCTCATTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q00332 RecName: Full=40S ribosomal protein S15a; AltName: Full=PPCB86666e-068
NP_172256 40S ribosomal protein S15a-1 [Arabidopsis thaliana]6631e-067
ABA46758 unknown [Solanum tuberosum]6622e-067
ACF22877 putative ribosomal protein S15 [Glycine max]6577e-067
XP_002528466 30S ribosomal protein S8, putative [Ricinus communis]6569e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q00332 40S ribosomal protein S15a6663e-069
P42798 40S ribosomal protein S15a-16637e-069
Q9LX88 40S ribosomal protein S15a-46556e-068
Q9AT34 40S ribosomal protein S15a6531e-067
O80646 40S ribosomal protein S15a-36172e-063

TrEMBL top hits (Blast detail)Scoree value
A1YMX3 40S ribosomal protein S15a6665e-068
B9DI04 AT1G07770 protein6631e-067
Q3HRZ3 Putative uncharacterized protein6621e-067
C6F117 Putative ribosomal protein S156575e-067
B9SR47 30S ribosomal protein S8, putative6567e-067

Arabidopsis top hits (Blast detail)Scoree value
AT1G07770.1 RPS15A (ribosomal protein s15a); structural constituent of ribosome6645e-070
AT1G07770.2 RPS15A (ribosomal protein s15a); structural constituent of ribosome6645e-070
AT5G59850.1 40S ribosomal protein S15A (RPS15aF)6645e-070
AT3G46040.1 RPS15AD (ribosomal protein S15A D); structural constituent of ribosome6564e-069
AT2G39590.1 40S ribosomal protein S15A (RPS15aC)6181e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  22%
 
92  22%
 
102  22%
 
113  33%

Unigene MembersMember information