RadishBase

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Information for unigene UN02857

FASTA Sequence

Unigene ID: UN02857	Length: 792	SSR
CCACCATCAAAGATTGGTTAGGGTTCATTCAAAGTTCGATAATAACATAATTAAGAAAGAAATTCAAAAGAGAGAGAGGGAGTAGA CGTCTTGTTATACAAGAAGGAAGCAGCCAGTGTTCTGAACAGAACAGAGAGCTCAGCTCCTAAAGACTAGATAATATCTATATAAA TTCTGTTTCTTAATACAGACATTTGAAAGTACTCAAAACACTAAACTGTCGTCAGGGATTGCTTGCAGAAGGATGCCTGAAGTCTG GACGGTTCAACGACTGCACATAGTTCATAGAGGGCAGGTTTGGCCACGGTGTATAAGCAGCCGGGTTGTTAACAAAGGGACTCATA GCCGGATGCCCGTAGTTTAGATTAGCTTGAGGACCTCTTGGCATCTGCGGGAAGCCTCCATCGTGAAACGGAATGTGCATTGGCAT CGGATTGAAGCTTTGGCCAGGTGGCGTAACCCTAACGTACCTATAGGCAGGATCCACGACATATCTTTCATAGCTCCTGTCGTAAT CCGGATCATACCGATCTTTCTCTCTATCTCTGATAATAGCTACTCTAGAAGTCCGAGAACCAGCATCAACAGAACTATTACTAACC GCCACTTCAGTCTCATTCCGGTTTATACCTTCAAGAGGAGGAGGAGGAGGAGCTCGTAGTAGCGATGAAGAATCTACAGAGTCAGA ACTGCTGGGACTACTAAAGATCCGAGCCCGGGCCTTATCATACTCTTCTTTCCTCTCTTCAACACTTCTCAGAAGATTCTGCTGCA CTCCCGACCCGCTACCTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002884813 nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]	761	9e-079
NP_566381 Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana]	743	1e-076
AAM64684 unknown [Arabidopsis thaliana]	739	3e-076
NP_850556 Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana]	680	2e-069
NP_568149 Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana]	432	1e-040

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q9SG83 Putative uncharacterized protein At3g10770	743	8e-077
Q8LBM0 Putative uncharacterized protein	739	2e-076
Q3EB95 Putative uncharacterized protein At3g10770.2	680	2e-069
Q93YN3 Putative uncharacterized protein At5g05100	432	9e-041
Q9FF64 Gb\|AAF19572.1	426	5e-040

Arabidopsis top hits (Blast detail)	Score	e value
AT3G10770.1 nucleic acid binding	744	4e-079
AT3G10770.2 nucleic acid binding	681	7e-072
AT5G05100.1 nucleic acid binding	432	6e-043
AT3G56680.1 nucleic acid binding	259	6e-023
AT2G40960.1 nucleic acid binding	256	1e-022

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	1			50%


11	1			50%

Unigene Members	Member information