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Information for unigene UN02887
| FASTA Sequence |
| Unigene ID: UN02887 | Length: 1027 |
SSR | | AATGCAAACAAGGCAAAGGAACTTGATACCAAAACCAATGTTACATCTAAGTGTCAAACACACGATCATTACAGTAACCTCAGTCT
TTGGGCGGTCAGTCTTAACTGAGACAGATGGATTACAGATTCTGACTCTTTTTTTTTTGGCAACTAGGACATATATATATATATAC
TCAGTACATAATAATAGTTGTGATATTTGATAAAAAGTGGTGAAGTGTTCTTCTTACAAAGGTCACCTCCCAGTTCTTGTTTTTTT
TCAGATGATGTTTCAGTTGCAGTTGGTGTCGTAGCTTGCAAGACCAATTAGTTCCGGCCCCTCCAATCGCGAATTGTTCTCAAAGT
TCTGCAAAGGAATGTGTTCAAACGGTCCTCCTGTTGGGATGGTTCCACACAAATCATTGCTCGATACATCAACAACTTTGAGGCTT
GGGATTTTCGTGAGTTCTCTAGGGATTGGACCAGTCAATTGGTTGTCATTGAGTCGTAGAAAGACCAGAGACTTGAGTTTCCCCAG
AGAAGTAGGAATCTTCCCAGTAAGATTGTTGTTGTAGAGATCCAAGCTGATGAGGCTCTTCAGGTTTGCAAGTTCGGAAGGTATAG
TTCCTTGGATGTTGTTCTTGTACAGCTCCAAGTACTGTAGATGTTCGAGCTTCCCAGCTCAGGTGCAAGATGTCCAGAAAGGTTTG
AATTACCCAAATCCACACGAGTGACGCGGTTGTCTTGGTTACAGGTGACGTGGAACCAGGTACAGGGGTTAACAAGAGTTGGATCC
CAGCTCTGGAGAACATGGTCTGGGTCCGATAAGCTCCTTCGTAGAGCGTAAAGAGCATCTCCCTCGGAGTTTGCTTCCGCGAGGTG
AATCAAAGCTAAGGTTAGAGTTAGATACGCTGCGAGGAGCTTCCACTGATAGTTTCTGGACGCCATGTTTGAGCTAATCGGAAAGG
GAATTGAGTTAACAGAGTGAATTTAGGGTTTTCGTTTCCCCCTTTTTTTTCTCACACTTTCTGTTGAAGAAATCGATTTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197608 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 607 | 1e-060 |
| NP_189960 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 594 | 3e-059 |
| BAD44554 unnamed protein product [Arabidopsis thaliana] | 594 | 3e-059 |
| CAA64565 LRR protein [Solanum lycopersicum] | 585 | 4e-058 |
| XP_002530200 serine-threonine protein kinase, plant-type, putative [Ricinus communis] | 583 | 6e-058 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XIC7 Somatic embryogenesis receptor kinase 2 | 325 | 2e-029 |
| Q94AG2 Somatic embryogenesis receptor kinase 1 | 313 | 6e-028 |
| Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 | 311 | 1e-027 |
| Q9SKG5 Somatic embryogenesis receptor kinase 4 | 295 | 7e-026 |
| Q8LPS5 Somatic embryogenesis receptor kinase 5 | 287 | 6e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FPJ5 AT5G21090 protein | 607 | 7e-061 |
| Q67XM7 MRNA, complete cds, clone: RAFL25-33-L05 | 594 | 2e-059 |
| Q6NQP4 At3g43740 | 594 | 2e-059 |
| Q96477 LRR protein | 585 | 3e-058 |
| B9SW31 Serine-threonine protein kinase, plant-type, putative | 583 | 4e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G21090.1 leucine-rich repeat protein, putative | 608 | 3e-063 |
| AT3G43740.1 leucine-rich repeat family protein | 595 | 1e-061 |
| AT3G43740.2 leucine-rich repeat family protein | 552 | 1e-056 |
| AT1G34210.1 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase | 325 | 2e-030 |
| AT1G71830.1 SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase | 313 | 5e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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