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Information for unigene UN02938
| FASTA Sequence |
| Unigene ID: UN02938 | Length: 1368 |
SSR | | GGGATCTAGGGTTGGATCGAGGGGGTAACTCACCGGCGATTTTGCGAGATGGTAAGAGACCGCGACGACTCTCCGCCGGAGAAGGC
GAGATGCGACGTCGAGGATAAAGACTACAGAAGAGAATCATCCCGGGAGAAATCGAGCCGTATCGAAAAGAAGCCGGTCGAAGAAG
AAGTGAGTCGGCGCGAATCGAAGAGAAAATCAAAAGACGGCAGAGACTCTGATTCTGGTTCGGGACTGGAGAGTGGTAGCGGGTCC
GAGTCGGAGAAGGAAGAGAGACGTGGAAGTAGAAAGTCGAGAGGGAAAAGGAAATCAGATCGGAGATCTCGTAGTAGTAGTAGACG
AAGCAGGAGGAGACGCTACGATGATTCCAGTAGTAGCTCGGAATCGGAATCTGAGTCGGAGTATTCGGACTCTGAGAGTGAGAGTG
AGAGTGAGGATGAGCGGAGGAGAAGGAAGAGGAAGAGAAGGGAGAGGGGGGAGAAAGAGAGAAAGAGAAGGAAGAGAGAGAAAGAG
AAGAAAAAGAAGAGAAGGATGGAGAAAGGAGTTGATGGAGATAGCAAGAAGAAGAAGAAGAAGGAAAAGAAGTCTGAGAAGGCCAA
GAAAGGAGCTGTGACTGAATCTTGGGGGAAATATGGAGTCATCAGAGAGACTGATATGTGGAATAAACGACCTGAGTTCACAGCAT
GGCTGCTTGAAGTAAAAGAGGTCAACTTGGAAAGCTTGCCACCATGGGAAGAGAAGAAAATGTTTAAAGATTTCATGGAAGATCAC
AATACTGGTACATTTACCTCCAAGAAATACTATGACATTGATGGTTACTATAGACGTAAGTTGGAGAAAGAGATGAAGAAGGGTTT
GAAGAAAGCTGGGCAGAGTGAACGGACTGTGTTCAATGACGAGGAGCAACGCCGGCTAGAGATGCAGGAAGCACGCGAGAAGCAGA
AGGAAGAAGAAGTTTTAGCTCTAAAGCGATCAATGGAAGGCGGAATGGCTCAAGCTATGAAGGAACAAGCTCGGCTTAAGGAAGAA
ATGGTCTACTTGTACAAGATTGGGGACATGGAGGGTGCAGCTGCTATTCAGAAAAGGTTGGATCCAGATGTTCCCATGTAATGTGG
AGGTTTTGGTTTAAGCTACAACATCTTCTAGTTCTCGTTTTTAAGCTGTGTTCCAAGTATCGAGCTTGTGTAACACGGCATAAGAA
GAAAAAAAAGCCAGAACGTTCATCTCTAGAGCTTTAAAGCATGATCTTGCCTTTTTTGGATATTATACACCATCGGCTAGTCAAGT
ATTGAAAACCGTTATGTTTTCTAATCGGCTAGTCAAGTATTGAAAACCGTTATGCTTTCTAGACTGTGTGTGACAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568799 uncharacterized protein [Arabidopsis thaliana] | 1402 | 1e-152 |
| AAM63475 unknown [Arabidopsis thaliana] | 1399 | 2e-152 |
| XP_002864283 hypothetical protein ARALYDRAFT_331729 [Arabidopsis lyrata subsp. lyrata] | 1318 | 6e-143 |
| XP_002282222 PREDICTED: hypothetical protein [Vitis vinifera] | 978 | 2e-103 |
| XP_002527602 nucleic acid binding protein, putative [Ricinus communis] | 976 | 3e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9U7E0 Transcriptional regulator ATRX homolog | 198 | 2e-014 |
| A1A5I1 Protein FAM133 | 192 | 9e-014 |
| Q8WXA9 Splicing factor, arginine/serine-rich 12 | 188 | 3e-013 |
| Q54V71 Uncharacterized protein DDB_G0280579 | 185 | 6e-013 |
| Q3SX41 Luc7-like protein 3 | 181 | 2e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCP8 Putative uncharacterized protein | 1399 | 2e-152 |
| B9SNN8 Nucleic acid binding protein, putative | 976 | 2e-103 |
| B8ASD2 Putative uncharacterized protein | 924 | 2e-097 |
| Q7X8Y1 OSJNBa0074L08.19 protein | 924 | 2e-097 |
| B6U2G4 Putative uncharacterized protein | 920 | 6e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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