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Information for unigene UN02939
| FASTA Sequence |
| Unigene ID: UN02939 | Length: 1386 |
| SNP | GGCTCCACCATAATTTACCCTTCTTATAAAACTCCTTCCATCCATCAAATTATTTTTTATCACAAGTCCCCTTCTCTCTAATACGT
CTCACATGAGCAAGAGCAATATCGATACATAAAAACAAAGAAAATGAACAAGAACAAGAAGGAAGTGAATATCGAGACAAAGAAAG
GGTCCACGATGGATGAGTGGCCTGAGCCAATCGTCCGTGTCCAGGCCTTAGCCGAGAGCAACCTCTCCTCTCTCCCCGACCGCTAC
ATCAAACCAGCATCTCAACGTCCCACCACAGTAGAGGAGGCCTCTGCCGCGACCAACATCCCAATCATTGACCTTGAAGGACTCTT
CTCGGAAGACGGGTCGCCAGATGAGGCCATCTTGGCTCAGATATCAGAGGCTTGCTGTGAGTGGGGATTCTTCCAAGTGTTGAACC
ATGGTGTGAGGCCAGAGCTGATGGACGCGGCTAGGGAGAATTGGAGAGAGTTTTTTCACTTGCCGGTTAATGAGAAGGAGACTTAC
AAAAACTCACCAAAAACCTATGAGGGCTATGGAAGCAGACTAGGAGTTGAGAAAGGAGCCATTCTTGACTGGAGTGATTATTACTT
TCTCCATCTTCTTCCTCCTCATTTGAAAGACTTCAACAAGTGGCCTTCTTTTCCTCCCACCATTAGAGAAGTGATCGATGAGTATG
GCAAGCAAGTAGTGAACCTATGCGGGAGAATTATGAAGGTATTATCACTAAACTTAGGATTAAAGGAGGATAAGTTTCAAGATGCG
TTTGGTGGTGAAAACATTGGGGCGTGTTTGAGGGTTAATTATTATCCAAAATGCCCTAGACCGGAGCTGGCTCTCGGTCTCTCCTC
CCACTCTGATCCTGGCGGTATGACTATTCTCTTACCAGACGATCAGGTCTTCGGTCTTCAAGTCCGTAAAAATGACATGTGGATCA
CCGTCAAGCCTCATCCTCATGCGTTCATCGTTAATATTGGTGATCAAATTCAGATACTAAGCAACTCAGTGTACAAGAGTGTGGAG
CATAGAGTGATAGTGAACTCGGAGAAAGAGAGAGTTTCGCTTGCTTTCTTCTACAATCCTAAAAGCGATATACCAATCCAACCATT
ACAAGAACTTGTAACCACTCATAATCCTCCTTTATATCCTCCCATGACCTTTGATCAATATAGACTCTTTATCCGAACTCAAGGTC
CACAAGGCAAATCTCATGTTGAATCTCTTGTTTCTCCTCGTTAGTTTTTTTCTCTTCCTTTAAAGAATATTAAATGTTTTGGTTTG
TTTCATGAAATTTACATCTGACTTGTATGTGTACAATCTTTCAGGATCTGATTTACCTTCAAGTAAATAAATACTGAATGAGATAT
ATTGTTATAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196179 oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] | 1761 | 3e-194 |
| XP_002871172 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1758 | 6e-194 |
| AAM61665 leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana] | 1701 | 2e-187 |
| XP_002882718 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1473 | 6e-161 |
| NP_187728 leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana] | 1456 | 6e-159 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q07512 Flavonol synthase/flavanone 3-hydroxylase | 602 | 3e-061 |
| Q39224 Protein SRG1 | 582 | 5e-059 |
| A2A1A0 S-norcoclaurine synthase 1 | 570 | 1e-057 |
| Q08508 1-aminocyclopropane-1-carboxylate oxidase 4 | 473 | 2e-046 |
| P31528 Probable 1-aminocyclopropane-1-carboxylate oxidase | 472 | 3e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFF6 AT5g05600/MOP10_14 | 1761 | 2e-194 |
| Q8LF06 Leucoanthocyanidin dioxygenase-like protein | 1701 | 2e-187 |
| Q9SRM3 Leucoanthocyanidin dioxygenase, putative; 41415-43854 | 1456 | 4e-159 |
| B9HHQ5 Predicted protein | 1388 | 3e-151 |
| C6T9L5 Putative uncharacterized protein | 1378 | 4e-150 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G05600.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1762 | 7e-197 |
| AT3G11180.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1457 | 2e-161 |
| AT3G55970.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1236 | 7e-136 |
| AT2G38240.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1093 | 3e-119 |
| AT3G21420.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 647 | 1e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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