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Information for unigene UN02954

FASTA Sequence
Unigene ID: UN02954Length: 1139 SSR 
GTATTTATCAAGGGCTCAAGCATATCAATCTGCAAACATTAACCAAGAATAGGCTTGAAATTATTCTGGAAAGATGGATTCAATCT
CGTCAAGTACCTTCCCCTGCTGAAGTGAGCAAAGAGGAAGGAGTTGATCTTTTTGGGAGCAGAGCTAGCAAAAGGGTTTGGCCAAT
CAGAATTGGATGCTTAGATCCAAAGGCTCAGATTCCTAAGCTATCAATGTTGGCGATGCAATCACTCTGCAGTGATGACGGTTACT
TCATAACTTTGGAGCTTTCCTCTCAAGGCTTCAGAAGAAGAACCCCAAGACCTGGGATCGTTATCTGTCTGCGTGAAGGAGCCAAC
AGTGTAGACATTATCACAAGTTTGTTACAGACATGTTACATACGTAAAGCCTTTGTAACCAATAGATTCAAGAGAAGGGATGCATC
ATCGTTTTCAGACTTGACGCTACAAGACTGGTCTTTACTCGCAGGAGAGAGCAATGTAACCGCACAAGATGATTTCACCGAACTGT
ATAAACAAATGCAAGAACAAGGTTGGATTGTGAAGAACATCTTGTTGAGCGCTGAAGAGCAGGTTCGATACATTTTCGACCAACAC
CAATCACTCACATTGTAACAGTAAAACTGTTTTTACACAGAGATTTGTCTGTAAATTTTTTATGCTTGTTAAAATCTATACACATC
TACACTAAGAGACACTTTTTGCTTATTTATAATGTGACAAACTTTCAATTTGAGAAGGAACTCGGCTCGGTGCTGTACATGGAGTA
CTCACTCATGCAAATGTTCGCTCTCTCATCGCTCCATTTCAGAACCTCCATAGCTAACTTGAGAGACGCATCGACGCTGTTCGGGT
CCAAACTCTTGCTGGAAGAAACAAACAGCTTTTTGCCGGTCAAGGAAGAGTAGAACCGCTTGAACTGAACCGCCATGTAATGGAAC
GCGAGCTGACCCAAAGTCGGGTTACCGTTGTTGTTGTTGTTGGAGCGGTGGCGACTGACCACAGGGTTAAAGTCTTGGAACCACTC
GCAGCGCGTCAACGGGACACGCTCCACTTTCTCTTCGAGAAGGTCGTACTTGTTGAGTATCAAGAGGAAGTCCATGTGCTCGAAGA
TGGGGTGAGTGATGATGCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880506 hypothetical protein ARALYDRAFT_481217 [Arabidopsis lyrata subsp. lyrata]8292e-086
NP_179928 uncharacterized protein [Arabidopsis thaliana]8086e-084
AAC23762 hypothetical protein [Arabidopsis thaliana]8086e-084
NP_565553 extra-large G-protein 1 [Arabidopsis thaliana]6374e-064
AAC19353 extra-large G-protein [Arabidopsis thaliana]6374e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q40224 Guanine nucleotide-binding protein alpha-1 subunit1353e-007
O04279 Guanine nucleotide-binding protein alpha-2 subunit1353e-007
P93163 Guanine nucleotide-binding protein alpha-2 subunit1353e-007
P49082 Guanine nucleotide-binding protein alpha-1 subunit1344e-007
P18064 Guanine nucleotide-binding protein alpha-1 subunit1335e-007

TrEMBL top hits (Blast detail)Scoree value
O80463 Putative uncharacterized protein At2g234708084e-084
Q67YT8 mRNA, clone: RAFL24-09-C048084e-084
O80462 Extra-large G-protein6373e-064
O81225 Extra-large G-protein6373e-064
B9HEG0 Predicted protein5047e-049

Arabidopsis top hits (Blast detail)Scoree value
AT2G23470.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: emb1879 (embryo defective 1879) (TAIR:AT5G49820.1); Has 259 Blast hits to 258 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 35; Plants - 93; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).8082e-086
AT2G23460.1 XLG1 (EXTRA-LARGE G-PROTEIN 1); guanyl nucleotide binding / signal transducer6381e-066
AT1G31930.1 XLG3 (extra-large GTP-binding protein 3); guanyl nucleotide binding / signal transducer2822e-025
AT1G31930.2 XLG3 (extra-large GTP-binding protein 3); guanyl nucleotide binding / signal transducer2822e-025
AT4G34390.1 XLG2 (extra-large GTP-binding protein 2); guanyl nucleotide binding / signal transducer2779e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
91  50%

Unigene MembersMember information