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Information for unigene UN02964

FASTA Sequence
Unigene ID: UN02964Length: 997 SSR 
GAAGAAGCACTTGATAGGGGGTTTATTCACTCTATTATATGATTCTAATACAAATATCATTTCAGAAGCAAACAGGAATCTCACAC
ATTTACAGAGAAACTACACACAAAAGAGGTAAACCTCAGAGAGAGAGAGAGAAGAATCAGATTGAGTTTGGAATACACAAGGAATA
ACAATTCGATTTTTTTTTTTTTTTGTATGAACATGGATATTCGGTCTCACTAGCTGCAGCAGCCAGTTTGGGGAGTAGTCTGGTGA
TCTGTGTTCTGCTTCAAGATGTTTCTCTTCACAGCACTTGATCCTTCTTCCAAAAGACTAGGTACCTCCATTATCTTCAACGCCAG
CTCTTCGAAACATTGCTCGACGTTTTGTCGAGTTCTAGCACTACACTCGAGAAACATGCACTTGAGTTCTTTCGCTAGAGCAATCC
CTTCTTCTCTGCTAACTCCTCTCTCAGATTCTCGATCAACTTTGTTTCCAACGAGCATCGTAACGCATTCTTGGTTAGTGGAGTAA
AGCTCAATCTCCTTACCCCACACATCTACTAAGTTTGTAAATGTCTCTCTTCTCGTCACATCATACACGAGAATGATTCCTTGGGC
GCCTCTGTAGTAAGAGCTCGTCAATGTTCTAAACCGTTCCTGTCCAGCTGTGTCCCAGATTGTGAGTTTCAGTCTTTTGCCTCCTA
CTGTCAACTGTTTAATCTTGAAATCAACACCGATGGTAGGAGCGAGATCTTCGACGGAGGTGGAAATGAAGCTGACAAGCAAACTG
CTTTTACCAACACCAGAATCTCCAATCAACAATATCTTAAACGACAGATCGTTTCCACTTTTCCCTGATGACGACCCCATTCTCTC
TCTACAAAAAAAAACACCAAGATTTTCTTGATCTCTCTCTCACTCAGATACTTTGCTCGATCTGTGAAGAAAGAACAAGCTAGGAG
AAAGAAACCCACGAGAGATCAAATCAAAATCAAATCCAACTTATTCAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568121 RAB GTPase-C2A [Arabidopsis thaliana]10057e-107
XP_002267276 PREDICTED: hypothetical protein [Vitis vinifera]8945e-094
XP_002326383 predicted protein [Populus trichocarpa]8821e-092
XP_002322909 predicted protein [Populus trichocarpa]8793e-092
CAA98163 RAB1X [Lotus japonicus]8669e-091

Swiss-Prot top hits (Blast detail)Scoree value
P36862 GTP-binding protein yptV35143e-051
Q6DHC1 Ras-related protein Rab-18-B4865e-048
Q5ZLG1 Ras-related protein Rab-184848e-048
Q5EB77 Ras-related protein Rab-184821e-047
Q0IIG8 Ras-related protein Rab-184802e-047

TrEMBL top hits (Blast detail)Scoree value
O49841 AtRab GTP-binding protein10055e-107
B9MTI0 Predicted protein8829e-093
B9IFU0 Predicted protein8792e-092
Q40206 RAB1X8666e-091
B9S0D3 Putative uncharacterized protein8631e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G03530.1 RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding10062e-109
AT3G09910.1 ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding / transcription factor binding8297e-089
AT1G43890.1 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding7859e-084
AT1G43890.2 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding7859e-084
AT1G43890.3 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding7859e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information