Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN02976

FASTA Sequence
Unigene ID: UN02976Length: 821 SSR 
AGCAAGAGCCTATGATGCAGCTGCACGCAGAATCCGCGGCAGTAAAGCTAAGGTGAATTTCCCGGAGGAGAACAACAACAACAACC
CCACAGTCTCCCAGAAACGCCCTTCTGCTAAGAAGCCAGTGGCTAAACCAAACCAAACCCCAGCTTTGGTTCAGCAGCAGCCAGTG
AGTCAGTACTGCAACAACTCCTTTGGTGATGTGAGTTACATGGAAGAGAAGCCTCAGATGTACAACAACCAGTACTTCAGTTCTGA
TCAGGGGAGTAACTCATTTGACTGCTCTGAGTTTGGGTTGAGTAATCACAACGGCCCCAAGACACCTGAGATCTCTTCAGTGGTTG
TCAGTAATCACCAAGCTCCGTTCACTGAAGAAACCAATGCAGCCAAGAAGCTCAAACTCAGCTCTCATGACGGGACAAGCTGCAAT
GATCAGTGTGATGATCTGATGGCATACCTTGACAATGCGTTGTGGGAGTCTCCATCTTCATTAGAAGTGGAAGCCATGCTGGGTGT
AGATGCTGCCGGTGTGACTCAGGGAGAGGAGAACCCTATGGACCTATGGAGCTTAGATGATATCAATTACATGCTGGAAGGAGTCT
TCTGAAGTGATTGATGGTTGCCGAGTTTGTAAATAAAACTATGTGTGTGTTGGTGAGTTTCATCCCATTGTGGATTCAATCTAGTG
AGTCTTTAACATTTTTTTTTGTCTTTCTGTTCTTTTCTTAAGACAGTTCATTAATCTTTTGAGCTCTGTTTTTGATCTTTCTTCAA
TGGCATTTTACATTATATAATAAAACATATGTGGAAGCTCAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885024 hypothetical protein ARALYDRAFT_897690 [Arabidopsis lyrata subsp. lyrata]4016e-037
NP_850582 ethylene-responsive transcription factor RAP2-2 [Arabidopsis thaliana]3935e-036
NP_566482 ethylene-responsive transcription factor RAP2-2 [Arabidopsis thaliana]3935e-036
NP_850583 ethylene-responsive transcription factor RAP2-2 [Arabidopsis thaliana]3935e-036
AAC49768 AP2 domain containing protein RAP2.2 [Arabidopsis thaliana]3935e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9LUM4 Ethylene-responsive transcription factor RAP2-26602e-068
Q9SSA8 Ethylene-responsive transcription factor RAP2-122435e-020
Q6K7E6 Ethylene-responsive transcription factor 11201e-005

TrEMBL top hits (Blast detail)Scoree value
A8MRL7 Uncharacterized protein At3g14230.33933e-036
A8MRC0 Uncharacterized protein At1g53910.32438e-019
B9DG10 AT1G53910 protein2438e-019
Q672K6 Ethylene response factor 11523e-008
Q70AB2 Ethylene transcription factor1514e-008

Arabidopsis top hits (Blast detail)Scoree value
AT3G14230.1 RAP2.2; DNA binding / transcription factor3977e-039
AT3G14230.2 RAP2.2; DNA binding / transcription factor3977e-039
AT3G14230.3 RAP2.2; DNA binding / transcription factor3977e-039
AT1G53910.1 RAP2.12; DNA binding / transcription factor2472e-021
AT1G53910.2 RAP2.12; DNA binding / transcription factor2472e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  80%
 
61  20%

Unigene MembersMember information