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Information for unigene UN02996

FASTA Sequence
Unigene ID: UN02996Length: 1391 SSR 
GGGCCGCGAGCTTTCTTCTTCATCTAAAAAAGAGAGAGAAAAATCTGTGAGAGAGAGAGAGAGAGACAGAGATGGCGAGGTCGAGG
AGAAAGTACAAGAACTCGAGAGCCAAAGTACGCGTCGCTCTGCCCAAGAAAAACCCAAACATCTTCAAACCAGCTTTCAACTTCCC
TCCCAAGCTCGCTCTCATGGCCGACGACGACGTCCCCGAGTGGGACGACCAGGCTAGCGTCATCCAGAACTACAAATCCTTCGGCG
TCATCTCTAACCCTAATCTCCTCGGTATCCGCTCCCGCACCGAGCACATGATCCAGGACGACTCCCTCAACGTTCCTCCCCCTCCT
GAGCCGCCGACCGATGATCCTATCGCCAAGGAGTTCGAGCCCATCGATTCCGGCAGCGAGCTCGAGGAAGACGATCTTAAGACAGC
ACTGGGGAAGCAAAGAAAAGATGGAAAGAGTGCTCCTTTACAGCCCCTTACTACTATGCAACGTACTCATATCAGACGCTTGGTAG
AGAAACATGGAGATGACATTGAGGCCATGTACCGAGACAGAAAGCTAAACTCGATGCAGCATTCGGTTGCAACTTTGCGGAAGCTA
TGCACTAGATATCTCATGTACAAGGATAAGAACCCTGTTTTAGTTCCATTCTGATGGAAAAGAAAATTATGCATCACATCTTTGTC
TCCTCTGCTCTCTCTCATTTTTGTTATAATCTTACAACAACCCTGCAACAATATGTTTATCAAGTTTTCTATAAATCCAAAGATAT
GTTTTCACTTGTTCTTCTTTTTTAAGATAGCTGCTAACCTATGCCAACTTATAATAAAAGAAACCATATAGTCTCCACAAACAAAT
CACTTTGTAAACAAACACTCTGTCACACACGGATGAAAGCAGATCACAATCAATATTGAGTTTTTTTTCATTAGCTTATATAATGA
ATCAAAACCAAGAAATCTTCAAGTACGAATGTCTCTCCCAAACCAAGTTGTTATATTCCAGTGAAGCTTTTGCATTGATGGTCCCA
ATACTCCTTGGCTTGCTTTAACCTCTCTGCTCTCTCTGTTTTACGCCTTTCTTCCCAATGCTCTCGGCAGCTGCATACATCACAGG
TTTAATATCTTGTAGTTTTTAGTCCTCCTTCTTAAAAAGACAGGTTTTGCAATAAGGAGCTTTTGGTTGTATATTTTTTTTTTACC
TTCGCTTAAGCAAGATACTTAGCTCATCCAAGCGAACAGCACCTTTATAAACACATATCTGTTATCGAATGGGCGAACTACAAGGG
TTAAGATACAAGATTAGTAGATCAATGAAGCAGTGGGGAGAATGGGTCTAACCTCACGGCAAAGCGGGCATTTTTCAGACGGGTCT
GCAGTCTTCAAGCCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563668 uncharacterized protein [Arabidopsis thaliana]9485e-100
XP_002892130 hypothetical protein ARALYDRAFT_470252 [Arabidopsis lyrata subsp. lyrata]9387e-099
XP_002523066 conserved hypothetical protein [Ricinus communis]7164e-073
XP_002321010 predicted protein [Populus trichocarpa]6976e-071
XP_002265366 PREDICTED: hypothetical protein [Vitis vinifera]6879e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRX9 E3 ubiquitin-protein ligase BAH11784e-012

TrEMBL top hits (Blast detail)Scoree value
Q8RWK5 At1g028709483e-100
B9SAP7 Putative uncharacterized protein7163e-073
B9I9S4 Predicted protein6974e-071
Q9SRY0 F22D16.13 protein5658e-056
D5ABN2 Putative uncharacterized protein5291e-051

Arabidopsis top hits (Blast detail)Scoree value
AT1G02870.1 unknown protein9482e-102
AT1G02860.1 NLA (nitrogen limitation adaptation); ubiquitin-protein ligase1793e-013
AT1G02860.2 NLA (nitrogen limitation adaptation); ubiquitin-protein ligase1668e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
181  50%

Unigene MembersMember information