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Information for unigene UN03001

FASTA Sequence
Unigene ID: UN03001Length: 1549 SSR 
GGATTCTTCACTCTGACTTTGTCTGAAAACTAGATCTCTCTCTCTCTCTCAATGGCTTCTCCTCTTCTCCCAACTTCAACTTCTCC
TGATCACCTCCCAGGTGGTAGTGATCCACAGTTACTAAGCTCTCTACGCGTCCTCGTTTCCCGCGTTCTAGCCTCCGCCCGTCACG
CTACTTCCGACGCTCGGCCCTGGACAGAGCTCATCGACCGGTCAGCGTTCTCACGGCCACCATCTCTCTCCGAGGCAGCGTCGCGT
GTAAGAAAGAACTTCTCCTACTTCAAATCCAACTACATAACCTTAGTAGCGATCTTGCTCGCGGCCTCTCTCCTCTCACACCCTTT
CGCGCTCATCCTCCTCGCGTCCCCCGCCGCTTCTTGGCTTTTCCTCTACGTGTTCCGTCCCTCGGATCAGCCGTTGGTCATCGGAG
GACGCACGTTCTCTGACCTGGAGACGCTGGGGATGCTCTGTCTTTGCACCGTGGTGGTGATGTTCATGACGAGCGTCGGTTCGCTC
TTGATGTCTACACTGGCTCTTGGGACGATGGCTGTGGCCGTGCACGGCGCGTTCCGTGCGCCTGAAGATCTGTTTCTTGAGGAGCA
AGAAACCATTGGATCTGGTCTTTTTACATTCTTTAACCAAAATGCTTCGAACGCGGCAGCTGCTGCTATTGCTACATCCGCTATGT
CACGAGTTCGAGCCTGATAAGCTTAATAAACATTACCATTTTCCAACAGATATACGTTTATACTATTGAATTTATTCACTCCTTTC
GTTTTTATTACTCATAATATTTCAATTTTTGTTAATGTATTCCTCGACAATTTTTGTTGATGTAATAAAATTTTCTAAACGTGTTT
AAGGAGTATTTAACTATCTTTGTTTATGTTGTTCTTTTACACCAAAGTGAAACTGTGTAAAGCCCAAAACCATATGAGTAAAAGAA
TAAGAAGAAGAAAATTACAGGTTGATCTCTTGTTTAAGAGCTCTCTCTATTGTATTGACTAGTCTCCTCTGCAGCCTTTGCCCACA
CATTGGCCATCTTCTCTGCATATCCAACCTGGCTAACAACAAACCCCTTCATCATACCCAGGAAGTCTGCACGCCGTTCTCTGTCC
AGCCTTTCACCCTCGGTCCGATTATTTTCCTTGATCCACTCATACTCCCTGATGGCTACGTTTTTGGCGTCTTCAGTGGCCTTGAT
GGTTTCTTTTAACTCTTCTATCTTCTTAATCCTTGATTTGTCCCCGCCAAACACCTTTGAAGATGCAGCTTCTAGCTTCTCTGCTC
TTCCTTCAAGTGAAGAAACCTCAGATAGAAGCGTCTGCACTGTAAGTAAAGCACTTGATCTATCTGCAAATGCGCCCTGGACCGCC
ATCATTACTCCTAGGTAATCGTGGGGTGCGTCCAAATGCTTGACCGTTTGTGAGTTCAGCTCTCTGTAAAACCTGCTAGCTTTCAC
AGCTGCCGTGGCTAAATTCTTCATATCATTGGCACGAGCTCGTTGAGAATTGAAGATAGCTTCTTCGTTCTCGAACTTAGTCAGCT
T

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871250 prenylated rab acceptor family protein [Arabidopsis lyrata subsp. lyrata]9648e-102
NP_196328 PRA1 family protein B6 [Arabidopsis thaliana]9361e-098
NP_196329 sorting nexin 2B [Arabidopsis thaliana]8284e-086
CAB87268 putative protein [Arabidopsis thaliana]8284e-086
XP_002866266 phox domain-containing protein [Arabidopsis lyrata subsp. lyrata]8161e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q9LYQ4 PRA1 family protein B69411e-100
Q9FLB6 PRA1 family protein B35801e-058
Q9SIY7 PRA1 family protein B25315e-053
O80915 PRA1 family protein B45243e-052
Q9LYN0 PRA1 family protein B15234e-052

TrEMBL top hits (Blast detail)Scoree value
B9DFS6 AT5G07120 protein8283e-086
Q9LYQ3 Putative uncharacterized protein T28J14_608283e-086
Q8L5Z7 Putative uncharacterized protein At5g584408005e-083
Q9FGH8 Similarity to sorting nexin8005e-083
B9RRH9 Sorting nexin-4, putative7772e-080

Arabidopsis top hits (Blast detail)Scoree value
AT5G07110.1 PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6)9421e-101
AT5G07120.1 SNX2b (SORTING NEXIN 2b); phosphoinositide binding / protein binding8291e-088
AT5G58440.1 SNX2a (SORTING NEXIN 2a); phosphoinositide binding8003e-085
AT5G05380.1 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3)5809e-060
AT2G40380.1 PRA1.B2 (PRENYLATED RAB ACCEPTOR 1.B2)5315e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  75%
 
211  25%

Unigene MembersMember information