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Information for unigene UN03009
| FASTA Sequence |
| Unigene ID: UN03009 | Length: 1001 |
SSR | | GGGATAGACATACGTGGCGGATATCTAGAGAGACTAGAGAGAGAGAGGAAAAGAAGGAGTTTCGTCGTTCGTCAATGGAGATCTCT
GCTGCGTCTGCTTCTCTAACTTCCTCTGGACTCGTTCCTCGACTTCTCCCTCCCTTGTTCTATCCTCCTCAAGCTCGAACTACTTC
CTGTGCACCATTTTCCTCTGCTAAACTCATTTCTCCTCCTCACAGACGTATACCTCCCTCTCCCTGTCTCGCTGATCAGTCTGCCT
CCACCGGGGTCAATGTTGTTGATTCAGATCCCATTGATGCTGTTAAGAGGAAAGCTATAGACATATCCCCTCAACTCAAAGGAGCT
TCAATATTTCTGGTTGGGATTAATAACCACATTAAAACCAACTTGGGGAAGCTTTTGGCTGAGTCTTTACGATATTACTACTTTGA
TAGTGATAAGTTGATCGCAGAGGCGGCTGGTGGAAATACATCTGTTCAAGCTTTGAAGGAGGCTGATGAGATGGCTTTTAAGGAAT
CAGAGACAGAAGTGCTGAAGCAGCTATCATCTATGGGTCGGCTTGTAGTTTGCGCTGGAGACGGTGCAGTCCAGAGCTTGACAAAT
CTTGCACTTCTAAGACACGGGATCTCCATTTGGATCGATGTTCCTCTAGAAATCGCAGCTAAAGGAGATGATCCATTCAGCTCGGA
ACCTTCCCCTGAGTTGTATGAGGCATTAAAAGCAAATTACGAAAAATCAAGAAAGGGTTACGATACAGCAGATGCAGTTATTTCCC
TTGAGAGAATAGCTACAAAGCTGGGATGGGAAGACTTGGAAACAGTAACTTCTGAAGAGCTTGCTTTGGAGGTCTTGAAAGAAATA
GAGAAGTTGACGAGAGTGAAGAAAATGATGGAGGAAGCTTCTCGACCTTTCTAGGTTGATATTTTACTCACTCAATCATGCATCGC
AAAATCTGTGAATTTTTTTAGGGTTTCTATCATGTTGTATATCATGAACATGTTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189325 shikimate kinase like 1 [Arabidopsis thaliana] | 1066 | 6e-114 |
| XP_002877000 shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1059 | 4e-113 |
| XP_002328924 shikimate kinase [Populus trichocarpa] | 718 | 1e-073 |
| XP_002512880 protein with unknown function [Ricinus communis] | 683 | 2e-069 |
| XP_002273840 PREDICTED: hypothetical protein [Vitis vinifera] | 482 | 3e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJ05 Shikimate kinase, chloroplastic | 330 | 6e-030 |
| Q00497 Shikimate kinase, chloroplastic | 276 | 1e-023 |
| B0JFW8 Shikimate kinase | 238 | 3e-019 |
| Q31PU5 Shikimate kinase | 219 | 4e-017 |
| Q5N4D3 Shikimate kinase | 219 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LW20 AT3G26900 protein | 1066 | 4e-114 |
| B9N0W2 Shikimate kinase | 718 | 9e-074 |
| B9RH21 Putative uncharacterized protein | 683 | 1e-069 |
| C6TEY0 Putative uncharacterized protein | 442 | 9e-042 |
| C5YPX9 Putative uncharacterized protein Sb08g018630 | 434 | 8e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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