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Information for unigene UN03079

FASTA Sequence
Unigene ID: UN03079Length: 1209 SSRSNP
ACTTCCAAAAACAAGAACCCTAAACTCTAAAGTTTCTTTCTTTCTTTCTTCTTCTTCCTTACAGTTTCTTGTTCTTGAAATTAGGG
TTAATTTCTTTTTTTCTTCCTTTAATTTAAATCACTTCCCCGGACCTTAAAGATCAGATCTTTCCTCAGAAAAAGAGATACCCAAC
TCGTGTTTTTTTGTGTGTGTGTGTCTGAATATAGATAAACGTCACATATATCCATATATTTGAGTAAGTAAAAGAGGAAAAAAAAT
GGGAAGGGGAAGAGTAGAGCTGAAGAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGAACGGATTGTTGA
AGAAAGCTTACGAATTGTCTGTTCTTTGCGATGCTGAGGTGGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGC
AGCTCCTCTAACATGATCAAGACACTGGAACGGTACCAGAAATGCAGTTATGGTTCTATTGAAGTCAACAACAAACCTGCCAAAGA
ACTTGAGAATAGCTACAGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACAAAGGAATCTTCTTGGGGAGG
ATTTAGGACCTCTCAACTCGAAGGAACTAGAGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATCAAGACA
CAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCAAATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGA
TGATATGATTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGATGGGAAGGCAATGAACAGAATGTCTCGTACGAGCATCATC
AAGCTCAGTCTCAAGGACTATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATCCAGTAGGCTCGGAGCAG
ATAACTGCAACAACACAAGCTCAGGCGCAGCCAGGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTCAATGTGATCAAAACT
CACAAACAAAAGATCCGTTTAAATAATATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGTGGCTATGTA
TATTGTCCTAAGGAATCTGTAAGACTTGAGTGTCTTTTGGGAAACCTTGCTACATTTAAGGATTGAAATGTGTGTGGAACTTGTTC
TGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568322 developmental protein SEPALLATA 1 [Arabidopsis thaliana]12513e-135
CAD48303 MADS-box protein SEP1-a [Brassica oleracea var. botrytis]12201e-131
XP_002873742 hypothetical protein ARALYDRAFT_909555 [Arabidopsis lyrata subsp. lyrata]12172e-131
AAA32732 transcription factor [Arabidopsis thaliana]12074e-130
ABD96852 hypothetical protein [Cleome spinosa]11152e-119

Swiss-Prot top hits (Blast detail)Scoree value
P29382 Developmental protein SEPALLATA 112511e-136
P29384 Developmental protein SEPALLATA 211022e-119
Q03489 Agamous-like MADS-box protein AGL9 homolog7545e-079
O22456 Developmental protein SEPALLATA 37358e-077
O04067 Agamous-like MADS-box protein AGL9 homolog7341e-076

TrEMBL top hits (Blast detail)Scoree value
Q5XXN8 SEPALLATA112512e-135
Q8GTF1 MADS-box protein SEP1-a12208e-132
Q5XXL8 SEPALLATA112172e-131
Q5XXN7 SEPALLATA112072e-130
Q1KUY4 Putative uncharacterized protein11151e-119

Arabidopsis top hits (Blast detail)Scoree value
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor12528e-138
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor11084e-121
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor11067e-121
AT1G24260.1 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor7374e-078
AT1G24260.2 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor7374e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  29%
 
101  14%
 
121  14%
 
63  43%

Unigene MembersMember information