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Information for unigene UN03080

FASTA Sequence
Unigene ID: UN03080Length: 582 SSR 
CTCTTCGTCGCCATTAGCTTAAAGAGAATCATCGTCATCATCATCCACCTCAACTACTCCATCCCCAAGAAGAAGTAGATTCGCGT
GGAGCTCTTTCTTCTTCGAGGTCTCCCAAGCTCTCTCTCACCTAACTGCCATGGCTACTAACAACAACAACAACAACCATAACCTC
TCGGATCAACAACCTCCTTCCGACGATTTCTTCGAGCAGATCCTCGGAATCTCCAACTTCTCCGCGTCTTCCGGCTCCGGTGGTCT
TTCTGCACTCCCCGGAGGGTTAAGCGGACCGCCGCCGATGATGCTTCAGCTCGGTTCCGGGGAAGAAGGGAGTCATAATAATCATA
TGGGTGGTGGTGGTGGTGGGCCTCTAGGGTTTCACAACGGGATGTTTCCGTTGGGGTTGAGCCTCGATCAAGGGAAAGGAGGAGGA
CAAGGCTTTCTTAAACCCGATGGAAGTGGTGGAAAACGTTTCCAAGATGATGTTGTTGGTGTTGATAATCGATGTTCCTCCATGAA
ACCTGTTTACCATGGGCAGCCAATGTCACAGCCACCTCCACCAATGCCGCATCAACAATCTTCAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34239 unnamed protein product [Thellungiella halophila]5625e-056
XP_002892144 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]5187e-051
NP_563672 transcription factor bHLH7 [Arabidopsis thaliana]5133e-050
AAM10948 putative bHLH transcription factor [Arabidopsis thaliana]4838e-047
AAM65759 putative bHLH transcription factor [Arabidopsis thaliana]4838e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q93Y00 Transcription factor bHLH75131e-051
O22768 Transcription factor UNE124834e-048

TrEMBL top hits (Blast detail)Scoree value
B9DFF4 AT4G02590 protein4836e-047
C0JP12 Putative basic helix-loop-helix protein BHLH41556e-009

Arabidopsis top hits (Blast detail)Scoree value
AT1G03040.1 basic helix-loop-helix (bHLH) family protein5131e-052
AT4G02590.1 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor4834e-049
AT4G02590.2 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor4834e-049
AT4G02590.3 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor2934e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
111  50%

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