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Information for unigene UN03084
| FASTA Sequence |
| Unigene ID: UN03084 | Length: 955 |
| SNP | GGATAAACAAAAAGTAGATCGTTCGGAGAGAAGACGGAGAAACGATGGCGGTAGAAGACAGTCTGAAGCCTGTTGTTGTTGTTGCT
ACGGAAGAAGAGAAACCAAATTCTCTAGAGCACCCGATTGATCGATACGATGAGGAAGGTGCGGAAGGAGGAGAGATCGCAGACGA
CGAATCATCGGGAAAATCCGAGGTTCCTGAATCGCATCGGTTGGAGAATTCGTGGACGTTCTGGTTCGATAATCCTTCCGTGAAAT
TAAAGCAGACGGCTTGGGGAAGCTCCTTACGATCCGTCTTCACCTTCTCCACCGCCGAGGAGTTCTGGAGTTTGTACAATAACATG
CGGCATCCGAGCAAGCTAGCTAACGGAGCTGACTTGTACTGTTTCAAGCACAATATCGAGCCTAAGTGGGAGGATCCTATCTGTGC
CAATGGAGGCAAATGGACTATGAATTTCTCTAGGGAGAAGTCTGATAAGCCCTTCCTTTACACCTTGCTTGCATTGATTGGAGAAC
AGTTTGACCATGGAGATGAAATCTGTGGAGCTGTTGTTAACATTAGAGCTAAGCAGGAAAGAATATCCATTTGGACTAAAAACGCT
TCCAACGAAGCTGCTCAGGTGAGCATTGGGAGACAATGGAAGGAGTTCCTTGATTACAATAGCAGCATTGGTTTCATCATCCATGA
GGATGCGAAGAAGCTGGACAGGAACGTTAAGAGCGCTTACACTGCCTGAAACGCCGCCGCCAACAACCTCTCCGATCTTTACACCG
TTTCAATCACAGTTTCGTATGTGAGAGATCTCTGTTTAACTTGACATGACGTCTTTGTTCTTGAGTGTTTGATTTGTTCACAAGTC
TTAACATTTCATTTACTATTAGTATATGTTAGTATGATATTCTTAAATTGATGGTGTATGAAATCAAACTTTTACCTTATAGTTTT
CAACTCTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADK94607 translation initiation factor eIF4E.a [Brassica rapa] | 1046 | 1e-111 |
| ADK94608 translation initiation factor eIF4E.c [Brassica rapa] | 1015 | 5e-108 |
| BAJ33702 unnamed protein product [Thellungiella halophila] | 959 | 1e-101 |
| XP_002868014 hypothetical protein ARALYDRAFT_493066 [Arabidopsis lyrata subsp. lyrata] | 929 | 4e-098 |
| NP_193538 translation initiation factor eIF-4E [Arabidopsis thaliana] | 920 | 5e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23252 Eukaryotic translation initiation factor 4E-1 | 920 | 2e-098 |
| P48599 Eukaryotic translation initiation factor 4E-1 | 754 | 4e-079 |
| O81481 Eukaryotic translation initiation factor 4E-1 | 742 | 9e-078 |
| P29557 Eukaryotic translation initiation factor 4E-1 | 720 | 3e-075 |
| Q9C7P6 Putative eukaryotic translation initiation factor 4E-4 | 688 | 2e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q54A13 Eukaryotic translation initiation factor 4E | 920 | 3e-097 |
| C6ZJZ3 Eukaryotic translation initiation factor 4E | 810 | 2e-084 |
| C0KXI0 Eukaryotic translation initiation factor 4e | 804 | 9e-084 |
| Q6TEC4 Eukaryotic translation initiation factor 4E | 804 | 9e-084 |
| Q0GRC7 Eukaryotic translation initiation factor 4E | 803 | 1e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G18040.1 EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E); RNA binding / RNA cap binding / protein binding / translation initiation factor | 921 | 1e-099 |
| AT1G29550.1 eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative | 689 | 1e-072 |
| AT1G29590.1 eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative | 686 | 3e-072 |
| AT5G35620.1 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1); RNA 7-methylguanosine cap binding / RNA binding / translation initiation factor | 469 | 4e-047 |
| AT5G35620.2 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1); RNA 7-methylguanosine cap binding / RNA binding / translation initiation factor | 406 | 8e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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