Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN03091

FASTA Sequence
Unigene ID: UN03091Length: 1234 SSR 
GATCAATGATTCAGTCATACTATCTAAAACCATTTTTTTGTTATGAACAGTTGATACCAACAACACAACTTTATAACAAGACACAT
GAGTTCGAAATCTAGGAAAGGAACCAAATATATTAAATAGCCTTTTAAATCTCTATCACAGATTCTACACTCCATATTTGTTTCTC
TTGACTCCGGTTGCTTTAACAATACAATGATACAAACGAGTGATGTAATGTTCGGTTTCATTGAAGTAGGTATATGTCTCTTCTCG
CTAAAACTTAGCAGACACGCAGAGACAATAAATAACCATTTGGTTTTGATGCAGTGCATCATCACCTCCTTCCTCGTTGTCCCGGT
CTTGAAGTTGGTTTTCTTGAAAACTGAAGCCGTAAGAACTTGGAATCAGGGTCGTTTTCATCCATTCGATAGCCTTGTAAGGTGGT
CAGAGCAGTTGCAGCACAGGCAGGGCTTGTAAAATCAACAAAGCAGAAAACAACAGGATCTCCGTTGCGGTGTTTGGAGTCTTTGG
TCACAAGTCTGGCTTCTCTATATCCTACAAAAGGTCTAAAGATATGAGCAACTTCCCTCCTAGAGCAATTAGGAGGAAGACCTTCA
ACGTAGAGAGTGTTGGAGGCATCTGGAGGGAGAGGAAGCGGCTCACGGTTACTACGCCTGTCAACAGAATCTAATGGATCAAAACC
ACCACCCATATCCCGACCGTTTAAACCAACGCCGCCACCGCGTCTCATCATAAACTCATCCATGGCAACAACACCACCATTACGTG
GAGGAGGACCTGCTTCTCCCAATGGCATAGAACTTGTTTGCACGCTTTGGAGGTACCGATCATAAGCTGATCCAATAGTTCTTGTA
TCAATATCCTCATCACGCGGGAAGTAACCACCACCACCACCGTGCATCTCATGAGCTTCGAAATCGGAACGGCGACGTTTTGGAGG
AGCACCACCTGGAGGATGCTGCTGCTGCTGGTGTCGCTGCTGGTTCCAGTACCCATCCGCCATGGGGAAAGTCTACAGAAAACAAC
AGAGGAAAATCGAGGGAATCAAGAAAATCACTAATTTCGCGGGATGACTATCGATTCTAGCTCGCTAGTTCTTCGCTTCCCGAATC
GACGGTTCTCTCCCCCGATTCTCTGCTTGATTTCGATTGCTTGGTACTAGGGTTCAATCTCGACATTTTTCTGATTCCATTCTTCA
CCCGGAGTTTAAGGATCCGAATCGTGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177820 RNA recognition motif-containing protein [Arabidopsis thaliana]7862e-081
XP_002889109 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]6081e-060
BAC42194 unknown protein [Arabidopsis thaliana]5579e-055
NP_001185414 RNA recognition motif-containing protein [Arabidopsis thaliana]5579e-055
NP_173554 nucleic acid/nucleotide binding protein [Arabidopsis thaliana]5004e-048

Swiss-Prot top hits (Blast detail)Scoree value
P34761 Protein WHI31246e-006
Q9W6I1 RNA-binding protein with multiple splicing1238e-006

TrEMBL top hits (Blast detail)Scoree value
A1A6K6 At1g769407862e-081
Q8GYL1 Putative uncharacterized protein At1g76940/F22K20_235576e-055
B9RQ14 Nucleic acid binding protein, putative4743e-045
C6TIW3 Putative uncharacterized protein4563e-043
B9GTK9 Predicted protein4545e-043

Arabidopsis top hits (Blast detail)Scoree value
AT1G76940.1 RNA recognition motif (RRM)-containing protein7877e-084
AT1G21320.2 nucleic acid binding / nucleotide binding6514e-068
AT1G21320.1 nucleic acid binding / nucleotide binding5861e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
92  67%

Unigene MembersMember information