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Information for unigene UN03188

FASTA Sequence
Unigene ID: UN03188Length: 2010 SSR 
AAAAGGGGGTTTGGGGTTTGGGTGATGAAGAGAGGGAAAGATGAAGAGAAGATACTGGAACCAATGTTTCCACGGCTTCACGTGAA
CGATGCAGACAAAGGAGGAGGGCCTAGAGCTCCTCCAAGAAACAAGATGGCTCTCTATGAGCAACTCAGCATCCCTTCTCAGAGGT
TCAACGATCGTACTAGTGCTTCCTTTCCCCGTAACACGTCCACCACTTTGGTCTCTCCTGGACCATCTAACCAGGCTTGTGGCGTG
GAAAGGAACTTAACTGGCCGAGCAACTGACAACTTTGTCTCGCAAATGCCCTTGATGGAAAATGTGCGGACGTCTTCATCACAACA
GCGTGGTGACCAGAGGAAAATAGTCAGAGAGGAAGATGATTTCGCAGTTCCTGTTTTTGTTAACTCGAGAAGATCCGGCAGAAGCA
GCAACAAGAGTGGCATTGACAAGGAGAAAGACACCACCTCAAAACGAGGTGGCTTGGCATCGAGTAGTGGCCGAGTAGATGGTTGT
GAAACGACGACACGAGTGGTGGGCGTTAATAATGGAGTTGAGTCTCATATGGCATCAGAAGAAGAAGAAGAAGAAGAAGAAGGTCA
TAGTGGAGGATACACCTCTCTGCAGCAGATAAATGAAGAAGAGGCAAGTGAGGATGTTTCTGATGATTCCATGGTGGATTCTGTTT
CTAGCGTCGATGTCTCTCCCGATGACGTTGTGGGAGTGTTGGGTCAAAAACGTTTCTGGAGAGCAAGGAAAGCTATTGCCAATCAA
CAAAGAGTATTTGCTGTTCAACTGTTTGAGCTGCACAGATTGATTAAGGTTCAAAGACTAATTGCTGCATCACCGGATGTTTTGCT
GGATGACATCAGTTATCTTGGAAAAGTTGCTGCTCCAGTGAAGAAGCTCCTTCCGTCAGGGTTTATAGTAAAGCCTCCTCTACCAC
AGGCTATCAAACGCAGGAGCAGCGGGGACTCGGAGAAGACTGACCAAAACAAAATGGAATGCTCAGCTGAGAACGTAGTTGGGAGG
CTGTCAAACCAAGGTGATCATCATCATCATCAACCTTCCAACTACATGCATTTTGCGACCAACCAACCCACTGCAAATGGATGTTA
CTATCCTCCTCCTCCTCAGCATCAGCCTCAGCCTCTTCCTTCCGGAGGAAACCAGCAATGGTTGATCCCTGTAATGTCTCCCTCCG
AAGGGCTGATATACAAGCCGCACCCAGGTCCGGGGCACACAGGGCCTGTCTGTGGAGGGTATTATGGTCATTTCATGCCTGCACCG
ATGGTCATGGGTAATTTCATGGGTGGTGGTGGTCAGCCTCCTCCGTTTCACCCGGGCATGGGATTCCCATCTCATGGTAATAATGG
CTACTTTCCTCCATATGGTTTCATGATGAACCCTTACTATTCCGGACAACAACAACAACCACCCAGTGAGCAAATGAACAACAGCA
TCCAACAACAACAACAACAGAGCTCAGTGAACGAAGCGGCTTCACAACAACAACAACAACAGCCGACGAAATTTTATCCTCGGGCT
AGAAAGAGCAGGCAAGGGAGCACGGGAAGTAGTCCAGAGGGAATAATTTCTGGTAAGAAGAACTCCTTTCGACCATTTTCAGCGGC
GGACAAGATCAACAATGCACCACCTGAGGAAATGATGACGACGACCACAACCACAACAACAACCGTTACTCAGACAACAAGAGATG
GAGCAGGAGTGACGAGAGTGATCAAGGTGGTTCCCCACAACGCGAATCTGGCGAGTGAGAACGCTGCAAGAATTTTCAGGTCAATA
CAAGAAGAGCGTAAACAGTATGACGACGCTTTCGCTGACTACTCTTAAGCCTCTCTCTTTTCTTTTTCTATCCTATTTTTAGTAAA
ATTGTGTTGTTAATGCATTTTAAACTGTGATAGAGATGTTATTCTCCAAATTTGTATAATATTAACGTATGAAAAGCTTGGATGTC
TATTATATTAAAGTCTTGCAACCATTTGGAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878908 hypothetical protein ARALYDRAFT_481449 [Arabidopsis lyrata subsp. lyrata]14684e-160
AEB33726 EARLY FLOWERING 3 [Brassica rapa]14121e-153
NP_180164 protein EARLY FLOWERING 3 [Arabidopsis thaliana]13091e-141
CAA72719 nematode responsive protein [Arabidopsis thaliana]11701e-125
XP_002516480 conserved hypothetical protein [Ricinus communis]6565e-066

Swiss-Prot top hits (Blast detail)Scoree value
O82804 Protein EARLY FLOWERING 314466e-159

TrEMBL top hits (Blast detail)Scoree value
B9RRW1 Putative uncharacterized protein6564e-066
B9HE00 Predicted protein6143e-061
B9RQ79 Putative uncharacterized protein5418e-053
A7YJG7 ELF3 protein5112e-049
Q50K78 ELF3 homologue4763e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G25930.1 ELF3 (EARLY FLOWERING 3); protein C-terminus binding / transcription factor14465e-160
AT3G21320.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ELF3 (EARLY FLOWERING 3); protein C-terminus binding / transcription factor (TAIR:AT2G25930.1); Has 39 Blast hits to 37 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).1866e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  17%
 
111  17%
 
104  67%

Unigene MembersMember information