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Information for unigene UN03189

FASTA Sequence
Unigene ID: UN03189Length: 1169 SSR 
GGTTTATCGAATTCTATCATTATTTCTTTGAAAAAATATCAAAAATCAATCCACAAAGTACTACTATTAAAAAGAGAGAGAGAGAA
ACAAAAACTAAAACTTAGGGCTACCAGTAACAGCATATGATTTGCTACGAGGATACAAAAGCTCAGAGACTTTCTTAGTCGTCTTC
GGTTTCACAGATCCTTCCTCTCCTTCTTCATCTTCATCTATCCTCGCCATCCCTACGCTCGTGCTCTTCGGCAACCCTCCATACTT
CATCTTCTTCTGATTCCTTGTTAGTGGTTTCAGCTTTCTTGTAAATCTCCACCAGTTCCTTCTGGAGACTCTGGTTCTTGACAGAA
GATTCTTCCACTTCACGGGTTAGTGCCTCAATCTCGTCTCTAGCTTTCTTCAGTCGATCTTTCACCGCTGCAAGTTTGCTAGCCAA
ACTCTCATTGTTTTCTCTTTCCTCAGCAATGTTCCTTTCATATCTTTCCTTAGCTTTATCAAACTCTGCGTGAATTACATCAAGCT
CTGATTCAAACTTTGAACACAAAGCTCTAGACTCATCCAGCAGCGTTTCCAAGTCAGAGACACGATCTCTAGATGCCTGGAGTGCT
TTCTTTGTTCCTTCAAGTTCATGTTTCAAATTTTGTACATTAGTGAGTTCTATATCCAGCATTCTCTTCGTGTCTTCGTACTTCTC
AGTAAGGTCAGCAACTTCGTCTTTACTCTCATTAACAGCCTTTACCGCATGATCCAGCTTTTCCTTGAGGTCCTGAATATCCTGCT
CTTTCCTGCTAATGAGCTCTGCATCAGCAGCTGCTCGCATTTCAGACGCCGATTTCAAAGCACTGTAATTTCTTGAAACATCATCA
AGCTTTTGGATGTAACTCTCTTTCTCAGCCTCTAAAGTCCTTACTCTAGTGTTCAGTTCCTCAATGGCAGAGTTCTTTGAGTCCAA
CTCAGTCTGCCTTCTTGTGACTTCTTCCTTAAGCTGTTTGATTTCTAATTTTGCTCCAGCAAGATCTCTGCTAGTTTGAGTGTAAG
CAGAGTTGAGTTTCTCCAGTTCTGCTTCTTTCTCTGCCAGTAATGTGCTAATGCGTTGAGTTTCTTCTTCCTTTTCTTTCAGCTCC
AAACTAAGCAAGTTGATCCGATCTTGTAGCTCCTCGACCAAATCAAGCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB02666 MAR-binding protein MFP1 [Arabidopsis thaliana]10936e-117
NP_188221 MAR-binding filament-like protein 1 [Arabidopsis thaliana]10936e-117
CAN70924 hypothetical protein VITISV_043806 [Vitis vinifera]6439e-065
XP_002284745 PREDICTED: hypothetical protein [Vitis vinifera]6383e-064
CBI36161 unnamed protein product [Vitis vinifera]6383e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q9LW85 MAR-binding filament-like protein 110932e-118
Q9M7J4 MAR-binding filament-like protein 1-15573e-056
P93203 MAR-binding filament-like protein 15172e-051
Q75JC9 Uncharacterized protein DDB_G02716701811e-012
O94488 Microtubule organizer protein 11792e-012

TrEMBL top hits (Blast detail)Scoree value
A5C6C7 Putative uncharacterized protein6436e-065
B9SQC4 ATP binding protein, putative6113e-061
B9GEK9 Predicted protein (Fragment)5952e-059
A2Y104 Putative uncharacterized protein4187e-039
C5Z186 Putative uncharacterized protein Sb09g0055404115e-038

Arabidopsis top hits (Blast detail)Scoree value
AT3G16000.1 MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1); DNA binding10932e-119
AT1G10140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031279 (InterPro:IPR016972); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58420.1); Has 38 Blast hits to 38 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).2043e-016
AT2G32240.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 221693 Blast hits to 95553 proteins in 2574 species: Archae - 2848; Bacteria - 44259; Metazoa - 97474; Fungi - 15490; Plants - 8386; Viruses - 1229; Other Eukaryotes - 52007 (source: NCBI BLink).1586e-011
AT4G32190.1 centromeric protein-related1505e-010
AT1G06530.1 myosin heavy chain-related1424e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  50%
 
121  50%

Unigene MembersMember information