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Information for unigene UN03216
| FASTA Sequence |
| Unigene ID: UN03216 | Length: 1605 |
SSR | | GGAAACTACTCGTCTGTGACCTCCAAGCGACTACGAGGACCATGGAAACCCTTTTCAGATTCTCACTTCGTCTTCTTCCGGTTTCC
GCCGCCGTGACACGTCGCGCAATCCATTTCCCCGTTTCAAGACCCTCTCCCTCACACTTTCTGAACCGTAGTAGCAGTAGTCTGTA
TAAGTTTTCATCTTCCTCCTCCTCAGTGAAGACAAATGCTGGTTGGCTGTTGGGTCTGGGGGACAACAAGAAGAAGAAGAAGCAAA
CGAATTTACCGGATATCGTAGCGGCTGGAGACCCGGTTCTGCACGAGAAGGCCCGAGAGGTTGACCCGGAAGAAATCGGGTCGGAG
CGTGTACAGAGGATAATTGATGATATGGTCAAAGTCATGAGATTGGCTCCTGGTGTTGGCCTTGCTGCTCCTCAGATTGGTATCCC
CTTAAGAATTATTGTTTTGGAAGATACAAAAGAGTATATAAGTTACGCACCAAAGGAGGAGGTTCTTGCTCAACAAAGGCGTCCTT
TTGATCTTATGGTAATGGTGAATCCGGAGCTGAAGGGGGTTAGCAACAAGAAAGCTCTCTTCTTCTAAGGATGCCTGAGTGTTGAT
GGATTCAGAGCTGTGGTGGAGAGATACCTTGAAGTGGAAGTCACAGGCTACGATCGTCAAGGAGAGAGAATCCAAGTGAATGCTTC
GGGCTGGCAAGCGAGGATTTTGCAGCACGAGTGCGATCATTTGGATGGTAATCTTTATGTGGATAAGATGATACCACGCACTTTCA
GGACAGTCGACAACTTGGACTTGCCTCTCGCAGATGGCTGTCCTAAACTCGGTCCTCGATGACCCAGACAGATTCTTTGTTATGTA
ATGTTTGATTCTTTTACTTTCTTAAATTTAAAAGTTTGGCCAGAGATTGTCGAACCCATGTCGGTTTGGTTTATACAGAAAAAAAT
AAATATTGTCCGAAAAAGATGGTTAATTTACAATCACCCAGAAAATTCGAAATTTATAAAGCTTAAAGATTGTATCAGAGAGCCAC
ACAGAGAATACAAAAAGAGAATATTGAAGACAGTATAGTTACTATTTATCTCTTATAAATTAGCATGCCTACCTCGATCTGCGCTT
CGGTGGCCTTTGCCTCGGATTGTTCTTCTTCCCCGGCGGTTTCTTCCCAAACGCAGAGCAGCAACCGCACGTCGACAGTATCGGAG
ACGGCGGCTCCACCGCAGGAGACACTCTTCCTGTTGTTCTGTGATGATGTCGTGGGCCTCCTCCTCCTCCGCCGTTGTTAGATCGA
CTCCTCTCGATCGTTGGTCCACCGGTTTTGATCGGCCTGAGATTTTCTTTCTCGTCGCCGTTGGGGTTCTGTTTCGCTTGCTCTGA
GGTTTCCGACAGCGGCTTGGGCTGCTGCTCGTTGCGTTGACTTTGTTCCTCTCTCTGCTCGGTGGCCTGTTTGTTGAGCTCGGCGA
TGACGCGGTCGTCCCAGACTATGCCGGAAGATCCCTGACGGCGGAAGGAGATGGTTGATCTTTGAAGACCTTCCATGACTCTCTCT
CTCTCTCTCTCTCTCTCTGGCACGAAACCCGAGAGTCTCTGCCTTGATTTCTTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563974 peptide deformylase 1A [Arabidopsis thaliana] | 1102 | 8e-118 |
| XP_002890102 hypothetical protein ARALYDRAFT_334826 [Arabidopsis lyrata subsp. lyrata] | 1102 | 8e-118 |
| AAD39667 Simalar to gi|4377403 Polypeptide Deformylase from Chlamydia pneumoniae genome gb|AE001687 [Arabidopsis thaliana] | 1077 | 6e-115 |
| XP_002517604 polypeptide deformylase, putative [Ricinus communis] | 919 | 1e-096 |
| BAJ53237 JHL06P13.18 [Jatropha curcas] | 886 | 9e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FV53 Peptide deformylase 1A, chloroplastic | 1102 | 3e-119 |
| Q9FUZ0 Peptide deformylase 1A, chloroplastic | 807 | 5e-085 |
| B6RGY0 Peptide deformylase 1A, chloroplastic | 729 | 6e-076 |
| Q9XI29 Uncharacterized protein At1g15400 | 519 | 1e-051 |
| Q7NJV3 Peptide deformylase 1 | 382 | 1e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RV35 Polypeptide deformylase, putative | 919 | 9e-097 |
| B9GKW9 Peptide deformylase | 881 | 2e-092 |
| Q2HVV7 Formylmethionine deformylase | 746 | 1e-076 |
| B4FRX0 Putative uncharacterized protein | 733 | 3e-075 |
| C5X3Z9 Putative uncharacterized protein Sb02g041130 | 729 | 1e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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