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Information for unigene UN03251
| FASTA Sequence |
| Unigene ID: UN03251 | Length: 1378 |
SSR | | GGGTTACCGGAACCTCACCTCCCCGGTTTCTCTCCTGCGCACTTTAGCATCCACCCGTTTCACCACCCCGTTGCTCCGTTACAAAC
ACTCTCCACGTCTCACTTCTTCTTCTTCTTCGGGGAGACTCACTTGCTTGTCTTCACTTCAAATCGACTCCACGAATCAAACCACA
CTCTCCTCTTCTGGACACTTCGATTACAATCGATTGGTGCCATGTCCTGCGCACAACTTTCCTCCAAGGATCGAGCACATGGTTGT
TTTAGAAGACGTTCGTGTCGCTGATTACATCTCTAAGGAATTGAATCTACCTCCTTTATATGTTGCAGACCTTATCGAATTTGGAG
CTGTGCATTACGCTCTTGTGTGCCCTAAGCCTCCACTCACCGCGACTCCTGAGCAAATTAAGCTGTTTAAAGAAGTGACCTCTCCT
TCGGTGCTGAGCAAGAGAACTTCCATCAAAGGGAAAACCGTTAGAGAAGCTCAGAAAACGTTTCGTGTCACTCATGTTAATCAGTT
TGTTGAAGCTGGAACTTACTTGCGTGTCCACGTTCACCCAAAACGCTCCCCGAGGTGTTATGAAATTGATTGGAAGTCGCGGGTTA
TTGCTGTGACTGACTCTTATGTCGTTTTGGATAAACCTGCCGGCACTACGGTTGGGGGAACGACAGATAACATAGAGGAGAGCTGT
GCTACATTTGCCTCGCGTGCATTAGATTTGGCTGAACCATTGAAAACAACACATCAGATTGATAACTGCACAGAAGACTGTGTCAT
CTTTGCTAGGACAAAAGAGTATTGCTCTGTCTTCCACACAAAGATAAGAAATAAAGAAGTGAAGACTCACCAGATCCGGGCCCAGC
TTGCAGCTTGTGGAGCACCGTTGGTTGGTGACTCTATGTACATGCCAGCAGCAATAGCAGAGACGGTGAGTCCTGGGATCAACCCT
TACGGGAAAGGAAATGAACATTGCACAATGGAGGAGAATGATAAGGAGACCGCTGTTTTTGAATGGATTGAGAGGCATGGGAAGGA
ACCGAAGGTTGGAATAGGTTTTCAAGCTTGTCAAATCTCGTGGGAGGATGATGATGGAGAGCATTTTTATGAAGCTGGGACTCCTT
GGTGGAGATGAAACACGATAGACTCAATCTCTATACCTCACATGTTCTTTAACAGTAGGAGCAGACAAAGTGGCTGAGAGAAAGAT
CGAGCAAGAATCTCTATGTAGCCATCTTGGTTGTAAGGGTAGAGTAGAGGCTAGGGAAACTCCATGAACAACTCTCACTTGTAATT
CCTTGAGCTTATGTCATTTTCGCTGTCATGCAGATTAGAGGTGGAGAATTGTTTTTTTTTGTTATAAGAAATGAAAATGTCTCTGT
TT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193908 RNA pseudourine synthase 6 [Arabidopsis thaliana] | 1196 | 8e-129 |
| XP_002867828 pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] | 1109 | 1e-118 |
| XP_002518515 ribosomal pseudouridine synthase, putative [Ricinus communis] | 988 | 1e-104 |
| XP_002264641 PREDICTED: hypothetical protein [Vitis vinifera] | 977 | 2e-103 |
| XP_002304926 predicted protein [Populus trichocarpa] | 977 | 2e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SVS0 RNA pseudourine synthase 6, chloroplastic | 1214 | 3e-132 |
| A3BN26 RNA pseudourine synthase 6, chloroplastic | 836 | 2e-088 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RXP6 Ribosomal pseudouridine synthase, putative | 988 | 7e-105 |
| B9H1E8 Predicted protein | 977 | 1e-103 |
| B9RXP5 Ribosomal pseudouridine synthase, putative | 904 | 4e-095 |
| C5X4R9 Putative uncharacterized protein Sb02g041930 | 820 | 2e-085 |
| A2YPK6 Putative uncharacterized protein | 805 | 1e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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