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Information for unigene UN03251

FASTA Sequence
Unigene ID: UN03251Length: 1378 SSR 
GGGTTACCGGAACCTCACCTCCCCGGTTTCTCTCCTGCGCACTTTAGCATCCACCCGTTTCACCACCCCGTTGCTCCGTTACAAAC
ACTCTCCACGTCTCACTTCTTCTTCTTCTTCGGGGAGACTCACTTGCTTGTCTTCACTTCAAATCGACTCCACGAATCAAACCACA
CTCTCCTCTTCTGGACACTTCGATTACAATCGATTGGTGCCATGTCCTGCGCACAACTTTCCTCCAAGGATCGAGCACATGGTTGT
TTTAGAAGACGTTCGTGTCGCTGATTACATCTCTAAGGAATTGAATCTACCTCCTTTATATGTTGCAGACCTTATCGAATTTGGAG
CTGTGCATTACGCTCTTGTGTGCCCTAAGCCTCCACTCACCGCGACTCCTGAGCAAATTAAGCTGTTTAAAGAAGTGACCTCTCCT
TCGGTGCTGAGCAAGAGAACTTCCATCAAAGGGAAAACCGTTAGAGAAGCTCAGAAAACGTTTCGTGTCACTCATGTTAATCAGTT
TGTTGAAGCTGGAACTTACTTGCGTGTCCACGTTCACCCAAAACGCTCCCCGAGGTGTTATGAAATTGATTGGAAGTCGCGGGTTA
TTGCTGTGACTGACTCTTATGTCGTTTTGGATAAACCTGCCGGCACTACGGTTGGGGGAACGACAGATAACATAGAGGAGAGCTGT
GCTACATTTGCCTCGCGTGCATTAGATTTGGCTGAACCATTGAAAACAACACATCAGATTGATAACTGCACAGAAGACTGTGTCAT
CTTTGCTAGGACAAAAGAGTATTGCTCTGTCTTCCACACAAAGATAAGAAATAAAGAAGTGAAGACTCACCAGATCCGGGCCCAGC
TTGCAGCTTGTGGAGCACCGTTGGTTGGTGACTCTATGTACATGCCAGCAGCAATAGCAGAGACGGTGAGTCCTGGGATCAACCCT
TACGGGAAAGGAAATGAACATTGCACAATGGAGGAGAATGATAAGGAGACCGCTGTTTTTGAATGGATTGAGAGGCATGGGAAGGA
ACCGAAGGTTGGAATAGGTTTTCAAGCTTGTCAAATCTCGTGGGAGGATGATGATGGAGAGCATTTTTATGAAGCTGGGACTCCTT
GGTGGAGATGAAACACGATAGACTCAATCTCTATACCTCACATGTTCTTTAACAGTAGGAGCAGACAAAGTGGCTGAGAGAAAGAT
CGAGCAAGAATCTCTATGTAGCCATCTTGGTTGTAAGGGTAGAGTAGAGGCTAGGGAAACTCCATGAACAACTCTCACTTGTAATT
CCTTGAGCTTATGTCATTTTCGCTGTCATGCAGATTAGAGGTGGAGAATTGTTTTTTTTTGTTATAAGAAATGAAAATGTCTCTGT
TT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193908 RNA pseudourine synthase 6 [Arabidopsis thaliana]11968e-129
XP_002867828 pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata]11091e-118
XP_002518515 ribosomal pseudouridine synthase, putative [Ricinus communis]9881e-104
XP_002264641 PREDICTED: hypothetical protein [Vitis vinifera]9772e-103
XP_002304926 predicted protein [Populus trichocarpa]9772e-103

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVS0 RNA pseudourine synthase 6, chloroplastic12143e-132
A3BN26 RNA pseudourine synthase 6, chloroplastic8362e-088

TrEMBL top hits (Blast detail)Scoree value
B9RXP6 Ribosomal pseudouridine synthase, putative9887e-105
B9H1E8 Predicted protein9771e-103
B9RXP5 Ribosomal pseudouridine synthase, putative9044e-095
C5X4R9 Putative uncharacterized protein Sb02g0419308202e-085
A2YPK6 Putative uncharacterized protein8051e-083

Arabidopsis top hits (Blast detail)Scoree value
AT4G21770.1 pseudouridine synthase family protein12142e-133

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
122  67%

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