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Information for unigene UN03273
FASTA Sequence |
Unigene ID: UN03273 | Length: 1140 |
SSR | | GAAAATGAAAGAAAACTAAACTGAGATTATTCTCCGTCTCGCTCACCTCTCCTCTCAGACTCATCATCCTCGGCTTCGACTCGATA
CTCATTTTCTCCGATTTAAAGTTTCCGTACTCGCCATGTATCGCACGGCAGCTTCACGAGCCAGGGCTCTCAAGGGATCTCTTAGC
CGAGGTTTGGGACCTGCGGCGCGTTATGCGAGCTCTAGTGCTGTTGCTACGAGCTCTTCTTCTTCTTCTTCTTCTTCTCCAGGTTT
CTTAGGCTGGTTGACTGGTGGATCCTCTGGCTCCCTTACTTCACTGGACATGCCACTACAGGGCGTTTCTCTTCCTCCCCCGCTTC
CTGACCGCGTCGAGCCAAGCAAACTCAAGATCACTACTCTTCCTAATGGCCTCAAAATCGCCTCAGAGATGTCTCCCAATCCGGCA
GCTTCTATTGGTTTGTACGTTGATTGTGGTTCGATCTATGAGGCTCCTTATTTCCATGGAGCAACGCATTTGCTTGAAAGGATGGC
TTTCAAGAGCACGACCAACAGAAGCCATCTACGTCTCGTCAGGGAAATAGAAGCTATTGGAGGGAACACCTCTGCGTCTGCGTCTC
GGGAGCAGATGAGTTACACTATTGATGCTCTTAAAACCTATGTCCCTGAAATGGTTGAGGTTCTTATTGACAGTGTGAGGAACCCT
GCTTTCTTGGACTGGGAAGTCAATGAAGAGCTACGTAAAATGAAGGTGGAGATAGCGGAACTTGCGAAGAACCCTATGGGGTTCCT
CATGGAGGCTGTTCTTGAAGACAGTAGACGAACTTACATTGAAAGACATTACAGATTTCACCAGCAAGATTATTTCAAAGCCTTTG
ACAATGGGTTCCTTTGGAGATGTGTTGTCTGTTCCGAGTTACGACACCGTAAGCAGCAAGTTTTGTTGAAGCAGGAAAATATTTGC
TAGACATTCAACAATGTTTTGAGACTTCTAAAATAAATCTTTTGGGGAGAAGAGAAGAAGACCCAACCAAATATTATTATTTTTTA
TTTAAATGGAATTTTGTATTCCAATAAATATTTTCTTACTACATTAACACTAAGTAACACAGTCACAGTGGTTCTGTGATGACATT
TTTATGCTGTTTCGAATTTCAG
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GenBank top hits (Blast detail) | Score | e value |
XP_002894348 hypothetical protein ARALYDRAFT_474319 [Arabidopsis lyrata subsp. lyrata] | 949 | 3e-100 |
NP_175610 putative mitochondrial-processing peptidase subunit alpha-1 [Arabidopsis thaliana] | 932 | 3e-098 |
AAM65922 mitochondrial processing peptidase alpha subunit, putative [Arabidopsis thaliana] | 932 | 3e-098 |
BAE98617 hypothetical protein [Arabidopsis thaliana] | 932 | 3e-098 |
NP_001077701 putative mitochondrial-processing peptidase subunit alpha-1 [Arabidopsis thaliana] | 932 | 3e-098 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9ZU25 Probable mitochondrial-processing peptidase subunit alpha-1 | 932 | 1e-099 |
O04308 Probable mitochondrial-processing peptidase subunit alpha-2 | 832 | 4e-088 |
P29677 Mitochondrial-processing peptidase subunit alpha | 687 | 3e-071 |
P23955 Mitochondrial-processing peptidase subunit alpha | 259 | 1e-021 |
P22695 Cytochrome b-c1 complex subunit 2, mitochondrial | 243 | 9e-020 |
TrEMBL top hits (Blast detail) | Score | e value |
A8MQE5 Uncharacterized protein At1g51980.2 | 932 | 2e-098 |
Q0WW81 Putative uncharacterized protein At1g51980 | 932 | 2e-098 |
B7FNA0 Putative uncharacterized protein | 728 | 8e-075 |
B9HLW1 Predicted protein | 719 | 9e-074 |
B8A9G6 Putative uncharacterized protein | 709 | 1e-072 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G51980.1 mitochondrial processing peptidase alpha subunit, putative | 958 | 9e-104 |
AT1G51980.2 mitochondrial processing peptidase alpha subunit, putative | 958 | 9e-104 |
AT3G16480.1 MPPalpha (mitochondrial processing peptidase alpha subunit); catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | 875 | 4e-094 |
AT3G02090.1 mitochondrial processing peptidase beta subunit, putative | 220 | 4e-018 |
AT3G02090.2 mitochondrial processing peptidase beta subunit, putative | 220 | 4e-018 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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